RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 HNF1AP20823 631 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 CARD18P57730 90 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SYPL2Q5VXT5 272 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 VHLLQ6RSH7 139 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 IL4RP24394 825 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 CPOXP36551 454 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SIAH1Q8IUQ4 282 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 H1FXQ92522 213 aaKnown RBP12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 TVP23CQ96ET8 276 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SPATA6Q9NWH7 488 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF724A8MTY0 619 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC43A1O75387 559 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 HSD17B1P14061 328 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 HMGCLP35914 325 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RPE65Q16518 533 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 PIP5KL1Q5T9C9 394 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR8G2PQ6IF36 304 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF852Q6ZMS4 543 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RHOUQ7L0Q8 258 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 CMTM8Q8IZV2 173 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 C1GALT1Q9NS00 363 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 CNIH4Q9P003 139 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 KLF8O95600 359 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 ELNP15502 786 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 DUSP1P28562 367 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 CD1CP29017 333 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 IDUAP35475 653 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 GNB1P62873 340 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RNF212Q495C1 297 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 UNC50Q53HI1 259 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RAB6CQ53S08 254 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 PARD6AQ9NPB6 346 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 A0A1W2PQ09 198 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 GABRPO00591 440 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 ATXN1LP0C7T5 689 aaKnown RBP12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RABIFP47224 123 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 FCRLAQ7L513 359 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 S1PR3Q99500 378 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RIMS4Q9H426 269 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 HEMK1Q9Y5R4 338 aaPredicted RBP12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 K7ERQ8 282 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 FAM110CQ1W6H9 321 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 TMEM43Q9BTV4 400 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 GKN1Q9NS71 199 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 FBXO34Q9NWN3 711 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 RNF24Q9Y225 148 aa12.95□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR7C1O76099 320 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 BMP2P12643 396 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR4F5Q8NH21 305 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 HLA-CQ95604 372 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR4F4Q96R69 305 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 RANBP9Q96S59 729 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 PELI2Q9HAT8 420 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ACOXLQ9NUZ1 547 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 TMEM269A0A1B0GVZ9 245 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 H3BQ06 376 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 HTR5AP47898 357 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 RFX2P48378 723 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 AGFG1P52594 562 aaKnown RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ZNF154Q13106 437 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 GRM2Q14416 872 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 RALYQ9UKM9 306 aaKnown RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 CRXO43186 299 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 BMI1P35226 326 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ACOT6Q3I5F7 207 aaPredicted RBP12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 BOD1Q96IK1 185 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 VN1R3Q9BXE9 311 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 KCMF1Q9P0J7 381 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 ICMTO60725 284 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 PFKMP08237 780 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 MTHFD2P13995 350 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 GM2AP17900 193 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 GPLD1P80108 840 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 TMEM163Q8TC26 289 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC6A18Q96N87 628 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 TECTBQ96PL2 329 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 MED18Q9BUE0 208 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 C20orf85Q9H1P6 137 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 PLEKHF2Q9H8W4 249 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 FBXO8Q9NRD0 319 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 WNT6Q9Y6F9 365 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 DCTN6O00399 190 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 PMP2P02689 132 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 H2AFB1P0C5Y9 115 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 NAGAP17050 411 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 SULT1A2P50226 295 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 SLC10A6Q3KNW5 377 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 CDRT4Q8N9R6 151 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 OR10G3Q8NGC4 313 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 RASD2Q96D21 266 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 SPOCK3Q9BQ16 436 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 GIMAP2Q9UG22 337 aa12.94□□□□□ -0.34
CSPG4P12-202ENST00000559989 FER1L6Q2WGJ9 1857 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms