RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 LINGO2Q7L985 606 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 SLC46A3Q7Z3Q1 461 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 PNPT1Q8TCS8 783 aaKnown RBP11.39□□□□□ -0.59
TPM1-220ENST00000559556 MAGEE2Q8TD90 523 aaPredicted RBP11.39□□□□□ -0.59
TPM1-220ENST00000559556 AURKBQ96GD4 344 aaPredicted RBP11.39□□□□□ -0.59
TPM1-220ENST00000559556 NELFAQ9H3P2 528 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 MOV10Q9HCE1 1003 aaKnown RBP11.39□□□□□ -0.59
TPM1-220ENST00000559556 RLIMQ9NVW2 624 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 P2RX2Q9UBL9 471 aa11.39□□□□□ -0.59
TPM1-220ENST00000559556 A0A096LPI6 279 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 A8MVM7 634 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 TMEM229AB2RXF0 380 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 KRT33AO76009 404 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 LGI1O95970 557 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 IGKV3-15P01624 115 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 CECR9P0C854 216 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 ZNF23P17027 643 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 MVDP53602 400 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 SH3BGRP55822 239 aaPredicted RBP11.38□□□□□ -0.59
TPM1-220ENST00000559556 NAAAQ02083 359 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 BNIP2Q12982 314 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 LIN52Q52LA3 116 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 TMEM225Q6GV28 225 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 VRK2Q86Y07 508 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 FAM169BQ8N8A8 192 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 ANKS4BQ8N8V4 417 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 BCL2L2Q92843 193 aaPredicted RBP11.38□□□□□ -0.59
TPM1-220ENST00000559556 C3orf49Q96BT1 292 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 FOXN4Q96NZ1 517 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 OR52E6Q96RD3 313 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 VRK1Q99986 396 aaPredicted RBP11.38□□□□□ -0.59
TPM1-220ENST00000559556 TAPBPLQ9BX59 468 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 LINC00470Q9BZP3 86 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 PLK3Q9H4B4 646 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 ADPRHL2Q9NX46 363 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 CALML5Q9NZT1 146 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 FBXO9Q9UK97 447 aaPredicted RBP11.38□□□□□ -0.59
TPM1-220ENST00000559556 RASD1Q9Y272 281 aa11.38□□□□□ -0.59
TPM1-220ENST00000559556 ZNF443Q9Y2A4 671 aaPredicted RBP11.38□□□□□ -0.59
TPM1-220ENST00000559556 SDHDO14521 159 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 FZD7O75084 574 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 KRT75O95678 551 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 GSNP06396 782 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 OR4A8P0C604 315 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 BGNP21810 368 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 GIFP27352 417 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 CALCRP30988 508 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 IDH3GP51553 393 aaPredicted RBP11.37□□□□□ -0.59
TPM1-220ENST00000559556 NME5P56597 212 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 UBE2NP61088 152 aaKnown RBP11.37□□□□□ -0.59
TPM1-220ENST00000559556 COPZ1P61923 177 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 ZSWIM7Q19AV6 140 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 KRT71Q3SY84 523 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 C1orf140Q5VVS0 124 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 PRAMEF8Q5VWM4 474 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 PRAMEF7Q5VXH5 474 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 NIPAL3Q6P499 406 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 ANKRD16Q6P6B7 361 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 ZNF621Q6ZSS3 439 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 SPATA19Q7Z5L4 167 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 EPHX4Q8IUS5 362 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 CADM2Q8N3J6 435 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 MREGQ8N565 214 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 ZNF540Q8NDQ6 660 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 NUP37Q8NFH4 326 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 OR4F15Q8NGB8 312 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 OR52P1PQ8NH57 321 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 STK35Q8TDR2 534 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 BPESC1Q9GZL8 116 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 SLC6A13Q9NSD5 602 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 GPR45Q9Y5Y3 372 aa11.37□□□□□ -0.59
TPM1-220ENST00000559556 FTCDNL1E5RQL4 147 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 RPL36A-HNRNPH2H7BZ11 118 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 NR5A2O00482 541 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 BCHEP06276 602 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 TFPTP0C1Z6 253 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 PRG2P13727 222 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 ETFAP13804 333 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
TPM1-220ENST00000559556 CRISP3P54108 245 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 TUBA1BP68363 451 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 TUBA4AP68366 448 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
TPM1-220ENST00000559556 BST1Q10588 318 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 STX3Q13277 289 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 CARTPTQ16568 116 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 TUBA1AQ71U36 451 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 MYPOPQ86VE0 399 aaPredicted RBP11.36□□□□□ -0.59
TPM1-220ENST00000559556 GLB1L3Q8NCI6 653 aaPredicted RBP11.36□□□□□ -0.59
TPM1-220ENST00000559556 ANKK1Q8NFD2 765 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 MFSD8Q8NHS3 518 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 SOX7Q9BT81 388 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 RAB1BQ9H0U4 201 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 ZNF442Q9H7R0 627 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 PNPOQ9NVS9 261 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 RCE1Q9Y256 329 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 CHST2Q9Y4C5 530 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 MEGF8Q7Z7M0 2845 aa11.36□□□□□ -0.59
TPM1-220ENST00000559556 RFXANKO14593 260 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms