RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 UBL7Q96S82 380 aaPredicted RBP14.93□□□□□ -0.02
TPM1-219ENST00000559397 NPAS1Q99742 590 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 COPS4Q9BT78 406 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 PRRG3Q9BZD7 231 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 QPCTLQ9NXS2 382 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 TAS2R10Q9NYW0 307 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 CNOT2Q9NZN8 540 aaKnown RBP14.93□□□□□ -0.02
TPM1-219ENST00000559397 B4GALT7Q9UBV7 327 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 VDAC3Q9Y277 283 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 CEPT1Q9Y6K0 416 aa14.93□□□□□ -0.02
TPM1-219ENST00000559397 A0A087WZY1 265 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 ELOA3DA6NLF2 546 aaPredicted RBP14.92□□□□□ -0.02
TPM1-219ENST00000559397 ACOT7O00154 380 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 HCN1O60741 890 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 MT-ND2P03891 347 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 CDK1P06493 297 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 PRKCAP17252 672 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 TTKP33981 857 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 NEDD8Q15843 81 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 SNAPC1Q16533 368 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 TMEM44Q2T9K0 475 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 ELOA3BQ3SY89 546 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 CLEC12AQ5QGZ9 265 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 MEDAGQ5VYS4 303 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 AHSA2Q719I0 299 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 GPR141Q7Z602 305 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 FAM109AQ8N4B1 249 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 FAM83FQ8NEG4 500 aaPredicted RBP14.92□□□□□ -0.02
TPM1-219ENST00000559397 ELOA3Q8NG57 546 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 OR2T33Q8NG76 320 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 TMEM163Q8TC26 289 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 POC1BQ8TC44 478 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 FANK1Q8TC84 345 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 MYDGFQ969H8 173 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 MUL1Q969V5 352 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 SGTBQ96EQ0 304 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 SLC38A2Q96QD8 506 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 OR2B2Q9GZK3 357 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 ENKD1Q9H0I2 346 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 ZDHHC11Q9H8X9 412 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 AMBNQ9NP70 447 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 ATRXP46100 2492 aa14.92□□□□□ -0.02
TPM1-219ENST00000559397 EFCAB10A6NFE3 127 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 BHLHE40O14503 412 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SURF4O15260 269 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 TLX2O43763 284 aaPredicted RBP14.91□□□□□ -0.02
TPM1-219ENST00000559397 HMGN1P05114 100 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 CELA3AP09093 270 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SAGP10523 405 aaPredicted RBP14.91□□□□□ -0.02
TPM1-219ENST00000559397 PIPP12273 146 aaPredicted RBP14.91□□□□□ -0.02
TPM1-219ENST00000559397 ZNF24P17028 368 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 HK1P19367 917 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 TACR3P29371 465 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 ZNF41P51814 821 aaPredicted RBP14.91□□□□□ -0.02
TPM1-219ENST00000559397 FOXK1P85037 733 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 EMX1Q04741 257 aaPredicted RBP14.91□□□□□ -0.02
TPM1-219ENST00000559397 RAB39AQ14964 217 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SYT14P1Q58G82 188 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SLC25A53Q5H9E4 307 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SMARCD3Q6STE5 483 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SLC46A3Q7Z3Q1 461 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SIAH3Q8IW03 269 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 LNX2Q8N448 690 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 SVOPQ8N4V2 548 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 ZNF563Q8TA94 476 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 FAR1Q8WVX9 515 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 LIPHQ8WWY8 451 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 ST8SIA1Q92185 356 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 TEX12Q9BXU0 123 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 CCDC90BQ9GZT6 254 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 DNAJC27Q9NZQ0 273 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 DKKL1Q9UK85 242 aa14.91□□□□□ -0.02
TPM1-219ENST00000559397 H3BSA7 217 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 ATXN7O15265 892 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 TRAPPC6AO75865 159 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 SEC14L2O76054 403 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 OR7A10O76100 309 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 BMP7P18075 431 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 ACVR2AP27037 513 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 GRK5P34947 590 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 SLC9A3P48764 834 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 MVKQ03426 396 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 TOMM20Q15388 145 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 GLYR1Q49A26 553 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 THSD4Q6ZMP0 1018 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 YRDCQ86U90 279 aaKnown RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 OAFQ86UD1 273 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 OR52L1Q8NGH7 329 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 OR13F1Q8NGS4 319 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 TMEM234Q8WY98 164 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 ZBTB8AQ96BR9 441 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 DTNBP1Q96EV8 351 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 MCCC2Q9HCC0 563 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 ACKR4Q9NPB9 350 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 OSGIN1Q9UJX0 560 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 KMT2BQ9UMN6 2715 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 KDM4EB2RXH2 506 aaPredicted RBP14.9□□□□□ -0.02
TPM1-219ENST00000559397 SHISA8B8ZZ34 492 aa14.9□□□□□ -0.02
TPM1-219ENST00000559397 FAM47E-STBD1D6RA91 191 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms