RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 KLHL24Q6TFL4 600 aa17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 CXXC5Q7LFL8 322 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 MIER2Q8N344 545 aa17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 C1orf162Q8NEQ5 155 aaPredicted RBP17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 GTF2H4Q92759 462 aa17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 KTI12Q96EK9 354 aaPredicted RBP17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 SF3B5Q9BWJ5 86 aaKnown RBP17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 SPATA9Q9BWV2 254 aa17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 FKRPQ9H9S5 495 aa17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 TMBIM4Q9HC24 238 aa17.9■□□□□ 0.46
TSPAN3-206ENST00000559373 IGHV1-18A0A0C4DH31 117 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 A0A0G2JPF8 293 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 HNRNPCL2B2RXH8 293 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 HNRNPCL3B7ZW38 293 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 CLIC1O00299 241 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 HNRNPCL1O60812 293 aaKnown RBP17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 HNRNPCL4P0DMR1 293 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 MAP2K6P52564 334 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 TBRG1Q3YBR2 411 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 RNF220Q5VTB9 566 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 COMTD1Q86VU5 262 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 EPHX4Q8IUS5 362 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 C10orf111Q8N326 155 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 C17orf78Q8N4C9 275 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 POMGNT2Q8NAT1 580 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 OR1K1Q8NGR3 316 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 TLCD1Q96CP7 247 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 SEC61A2Q9H9S3 476 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 SLAMF8Q9P0V8 285 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 USH1CQ9Y6N9 552 aa17.89■□□□□ 0.45
TSPAN3-206ENST00000559373 TMEM247A6NEH6 219 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 TMEM229AB2RXF0 380 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 TLX2O43763 284 aaPredicted RBP17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 WNT11O96014 354 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 APOBEC3AP31941 199 aaPredicted RBP17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 CLDN17P56750 224 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 EGR4Q05215 589 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 MST1LQ2TV78 715 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 TMEM249Q2WGJ8 235 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 ZNF544Q6NX49 715 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 VHLLQ6RSH7 139 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 NFKBIDQ8NI38 313 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 FAM168AQ92567 244 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 PTDSS2Q9BVG9 487 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 CACYBPQ9HB71 228 aaKnown RBP17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 TMEM45AQ9NWC5 275 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 SLC25A37Q9NYZ2 338 aa17.88■□□□□ 0.45
TSPAN3-206ENST00000559373 A8MV72 311 aaPredicted RBP17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 ZNF587BE7ETH6 402 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 NPIPB7O75200 414 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 AHSA1O95433 338 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 PNMTP11086 282 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 GLIPR1L2Q4G1C9 344 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 EPGNQ6UW88 154 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 HIPK1Q86Z02 1210 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 TNFRSF13CQ96RJ3 184 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 EBF4Q9BQW3 602 aa17.87■□□□□ 0.45
TSPAN3-206ENST00000559373 ELOA3DA6NLF2 546 aaPredicted RBP17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 C5orf58C9J3I9 102 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 FTCDNL1E5RQL4 147 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 H7C417 338 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 TPST1O60507 370 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 HOXB9P17482 250 aaPredicted RBP17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 IL1RL1Q01638 556 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 ROR2Q01974 943 aaKnown RBP17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 ELOA3BQ3SY89 546 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 C6orf52Q5T4I8 152 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 MYPOPQ86VE0 399 aaPredicted RBP17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 MSRB3Q8IXL7 192 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 ANKS4BQ8N8V4 417 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 ELOA3Q8NG57 546 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 RNF217Q8TC41 542 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 C10orf105Q8TEF2 133 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 BCL2L2Q92843 193 aaPredicted RBP17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 SORCS2Q96PQ0 1159 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 SLC38A2Q96QD8 506 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 NELFAQ9H3P2 528 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 ARMC7Q9H6L4 198 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 A4GALTQ9NPC4 353 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 SLCO1B3Q9NPD5 702 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 RPS6KB2Q9UBS0 482 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 IFT52Q9Y366 437 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 PMF1-BGLAPU3KQ54 211 aa17.86■□□□□ 0.45
TSPAN3-206ENST00000559373 SEC14L2O76054 403 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 CELA3BP08861 270 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 HTR2AP28223 471 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 SLC18A1P54219 525 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 UBE2NP61088 152 aaKnown RBP17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 CHRNB3Q05901 458 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 CARTPTQ16568 116 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 PAGE3Q5JUK9 113 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.85■□□□□ 0.455e-29■■□□□ 14.5
TSPAN3-206ENST00000559373 MSANTD1Q6ZTZ1 278 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 ABHD12BQ7Z5M8 362 aaPredicted RBP17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 FUNDC1Q8IVP5 155 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 MFSD8Q8NHS3 518 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 STK35Q8TDR2 534 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 TAAR8Q969N4 342 aa17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 ZNF837Q96EG3 531 aaPredicted RBP17.85■□□□□ 0.45
TSPAN3-206ENST00000559373 VRK1Q99986 396 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms