RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 LIME1Q9H400 295 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 BCO1Q9HAY6 547 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 MED4Q9NPJ6 270 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 MBNL3Q9NUK0 354 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 KLHL28Q9NXS3 571 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ELOVL5Q9NYP7 299 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TMED7Q9Y3B3 224 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 FLNAP21333 2647 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZC3H12DA2A288 527 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZNF814B7Z6K7 855 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 C16orf97H3BN30 126 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SULT2B1O00204 365 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 FBP2O00757 339 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ANGPT2O15123 496 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 CYTIPO60759 359 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 RAMP1O60894 148 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 PMS2P2O95744 297 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 HRGP04196 525 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 RNASE1P07998 156 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 VIMP08670 466 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TROVE2P10155 538 aaKnown RBP eCLIP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TFPIP10646 304 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ETS2P15036 469 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 CCNA2P20248 432 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 EDNRAP25101 427 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TACR3P29371 465 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 GDNFP39905 211 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 HTR3AP46098 478 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 POLR2HP52434 150 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 MTPNP58546 118 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 CSNK2A1P68400 391 aaPredicted RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 HOXC5Q00444 222 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 CDK6Q00534 326 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 PIN1Q13526 163 aaPredicted RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 LARS2Q15031 903 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 GLIPR1L2Q4G1C9 344 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 HSP90B2PQ58FF3 399 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZNF311Q5JNZ3 666 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 REEP3Q6NUK4 255 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 STAC2Q6ZMT1 411 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZNF550Q7Z398 422 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SERPINA11Q86U17 422 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 PTOV1Q86YD1 416 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 GABRG1Q8N1C3 465 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ANKRD27Q96NW4 1050 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZNF300Q96RE9 604 aaPredicted RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 CGREF1Q99674 301 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SLC39A3Q9BRY0 314 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TMEM38AQ9H6F2 299 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZMAT4Q9H898 229 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 KLHL9Q9P2J3 617 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 IFT52Q9Y366 437 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 NDUFAF1Q9Y375 327 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 HDGFL3Q9Y3E1 203 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SPIN1Q9Y657 262 aaPredicted RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ACANP16112 2415 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 VPS13CQ709C8 3753 aa5.34□□□□□ -1.56
CTDSPL2-204ENST00000558966 IGKV3D-15A0A087WSY6 115 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 ZNF716A6NP11 495 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 KIAA1324LA8MWY0 1029 aaPredicted RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 DEFB108AA8MXU0 73 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 EVPLLA8MZ36 301 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 C5orf58C9J3I9 102 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 FXYD1O00168 92 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 ZNF208O43345 1280 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 TPST1O60507 370 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 GCM2O75603 506 aaPredicted RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 GOSR1O95249 250 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 YES1P07947 543 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 UQCRBP14927 111 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 PSMB1P20618 241 aaKnown RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 CRYGSP22914 178 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 AQP1P29972 269 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 LSP1P33241 339 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 CLK1P49759 484 aaKnown RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 ARFIP2P53365 341 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 H3F3AP84243 136 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 RASGEF1BQ0VAM2 473 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 BNIP2Q12982 314 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 NFYCQ13952 458 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 SCARB2Q14108 478 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 CAPRIN1Q14444 709 aaKnown RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 ZSWIM7Q19AV6 140 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 WBP2NLQ6ICG8 309 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 PGM2L1Q6PCE3 622 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 DHRS4L2Q6PKH6 230 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 ATG4DQ86TL0 474 aaPredicted RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 CADM2Q8N3J6 435 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 C10orf82Q8WW14 230 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 SLC35B4Q969S0 331 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 C3orf49Q96BT1 292 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 ZNF317Q96PQ6 595 aaPredicted RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 TACO1Q9BSH4 297 aaKnown RBP5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 MED18Q9BUE0 208 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 KLHL4Q9C0H6 718 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 PLEKHF2Q9H8W4 249 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 SAR1AQ9NR31 198 aa5.33□□□□□ -1.56
CTDSPL2-204ENST00000558966 C6orf203Q9P0P8 240 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms