RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 SERPINA11Q86U17 422 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 DTX2Q86UW9 622 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 ZNF100Q8IYN0 542 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 DEPDC4Q8N2C3 294 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 CADM2Q8N3J6 435 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 DNAJA4Q8WW22 397 aaPredicted RBP13.46□□□□□ -0.25
RPL28-206ENST00000558752 SF3B5Q9BWJ5 86 aaKnown RBP13.46□□□□□ -0.25
RPL28-206ENST00000558752 OR11A1Q9GZK7 315 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 FGFR1OP2Q9NVK5 253 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 RPS6KB2Q9UBS0 482 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 SLC13A4Q9UKG4 626 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 ANGPT4Q9Y264 503 aa13.46□□□□□ -0.25
RPL28-206ENST00000558752 NOSIPQ9Y314 301 aaKnown RBP13.46□□□□□ -0.25
RPL28-206ENST00000558752 DPRXA6NFQ7 191 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 BBIP1A8MTZ0 92 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 ZNF814B7Z6K7 855 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 SSX4O60224 188 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 C8BP07358 591 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 FAM157CP0CG43 387 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 PNMTP11086 282 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 GGT1P19440 569 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 MDH1P40925 334 aaKnown RBP13.45□□□□□ -0.26
RPL28-206ENST00000558752 C1QTNF12Q5T7M4 302 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 KLHL17Q6TDP4 642 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 RETREG3Q86VR2 466 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 PHC2Q8IXK0 858 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 NEUROG1Q92886 237 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 TAPBPLQ9BX59 468 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 AMBRA1Q9C0C7 1298 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 IKZF5Q9H5V7 419 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 KAT8Q9H7Z6 458 aaKnown RBP13.45□□□□□ -0.26
RPL28-206ENST00000558752 SAR1AQ9NR31 198 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 KLHL14Q9P2G3 628 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 LPAR3Q9UBY5 353 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 MXRA5Q9NR99 2828 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 PRR14LQ5THK1 2151 aa13.45□□□□□ -0.26
RPL28-206ENST00000558752 LIPT2A6NK58 231 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 ZNF716A6NP11 495 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 OR2T1O43869 369 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 MRPL33O75394 65 aaKnown RBP13.44□□□□□ -0.26
RPL28-206ENST00000558752 MFN2O95140 757 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 IMPDH2P12268 514 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 PRG2P13727 222 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 SLC25A16P16260 332 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 GUCY1A3Q02108 690 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 KLF10Q13118 480 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 RAB35Q15286 201 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 CYP51A1Q16850 503 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 MMEL1Q495T6 779 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 INTS11Q5TA45 600 aaKnown RBP13.44□□□□□ -0.26
RPL28-206ENST00000558752 FBXW9Q5XUX1 488 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 FAM91A1Q658Y4 838 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 C6orf89Q6UWU4 347 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 TMEM108Q6UXF1 575 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 NET1Q7Z628 596 aaPredicted RBP13.44□□□□□ -0.26
RPL28-206ENST00000558752 PATL1Q86TB9 770 aaKnown RBP13.44□□□□□ -0.26
RPL28-206ENST00000558752 ATG4DQ86TL0 474 aaPredicted RBP13.44□□□□□ -0.26
RPL28-206ENST00000558752 ARMC8Q8IUR7 673 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 FBXL14Q8N1E6 418 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 PCYOX1LQ8NBM8 494 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 RASSF5Q8WWW0 418 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 C3orf49Q96BT1 292 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 BEX2Q9BXY8 128 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 TMEM27Q9HBJ8 222 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 GID8Q9NWU2 228 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 TMEM160Q9NX00 188 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 SELENONQ9NZV5 590 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 POU2F3Q9UKI9 436 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 B3GALT5Q9Y2C3 310 aa13.44□□□□□ -0.26
RPL28-206ENST00000558752 ABCD4O14678 606 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 NPIPB7O75200 414 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 LYZL6O75951 148 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 CR1P17927 2039 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 PTAFRP25105 342 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 PCBP3P57721 371 aaKnown RBP13.43□□□□□ -0.26
RPL28-206ENST00000558752 CEACAM7Q14002 265 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 SLC17A1Q14916 467 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 TRMT5Q32P41 509 aaKnown RBP13.43□□□□□ -0.26
RPL28-206ENST00000558752 C1orf140Q5VVS0 124 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 TMEM225Q6GV28 225 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 ULK3Q6PHR2 472 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 PTOV1Q86YD1 416 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 CCDC103Q8IW40 242 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 C10orf111Q8N326 155 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 OR8J3Q8NGG0 315 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 OR52E4Q8NGH9 312 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 MFSD8Q8NHS3 518 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 APH1AQ96BI3 265 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 ZNF775Q96BV0 537 aaPredicted RBP13.43□□□□□ -0.26
RPL28-206ENST00000558752 LRRC58Q96CX6 371 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 SLC47A1Q96FL8 570 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 ZNF300Q96RE9 604 aaPredicted RBP13.43□□□□□ -0.26
RPL28-206ENST00000558752 TNFRSF13CQ96RJ3 184 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 KCNK17Q96T54 332 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 DHRS9Q9BPW9 319 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 CBLN4Q9NTU7 201 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 GDF2Q9UK05 429 aaPredicted RBP13.43□□□□□ -0.26
RPL28-206ENST00000558752 SLC9A8Q9Y2E8 581 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 AP3M1Q9Y2T2 418 aa13.43□□□□□ -0.26
RPL28-206ENST00000558752 ZC3H12DA2A288 527 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms