RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 EPHX4Q8IUS5 362 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 FUNDC1Q8IVP5 155 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 FBXL14Q8N1E6 418 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 DEPDC4Q8N2C3 294 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 MIER2Q8N344 545 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 C17orf78Q8N4C9 275 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 POMGNT2Q8NAT1 580 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 HTRA1Q92743 480 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 MAL2Q969L2 176 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 C3orf49Q96BT1 292 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 ADAD1Q96M93 576 aaKnown RBP10.07□□□□□ -0.8
CASC4-205ENST00000558735 RHNO1Q9BSD3 238 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 BCL2L10Q9HD36 194 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 SLC52A3Q9NQ40 469 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 YAE1D1Q9NRH1 226 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 THUMPD1Q9NXG2 353 aaKnown RBP10.07□□□□□ -0.8
CASC4-205ENST00000558735 SLAMF8Q9P0V8 285 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 CDC42EP3Q9UKI2 254 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 AMDHD2Q9Y303 409 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 IFT52Q9Y366 437 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 USH1CQ9Y6N9 552 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 CR1P17927 2039 aa10.07□□□□□ -0.8
CASC4-205ENST00000558735 A0A096LNT2 108 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 TMEM229AB2RXF0 380 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 FTCDNL1E5RQL4 147 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 FRS3O43559 492 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 VAMP5O95183 116 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 NCF2P19878 526 aaPredicted RBP10.06□□□□□ -0.8
CASC4-205ENST00000558735 APOBEC3AP31941 199 aaPredicted RBP10.06□□□□□ -0.8
CASC4-205ENST00000558735 MRPL19P49406 292 aaKnown RBP10.06□□□□□ -0.8
CASC4-205ENST00000558735 SELENOPP49908 381 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 RAB35Q15286 201 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 MST1LQ2TV78 715 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 KRTAP24-1Q3LI83 254 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 HIKESHIQ53FT3 197 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 C1QTNF12Q5T7M4 302 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 PRAMEF8Q5VWM4 474 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 PRAMEF7Q5VXH5 474 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 ZNF544Q6NX49 715 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 LINGO2Q7L985 606 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 C10orf111Q8N326 155 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 KDM8Q8N371 416 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 MFSD8Q8NHS3 518 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 STK35Q8TDR2 534 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 BCL2L2Q92843 193 aaPredicted RBP10.06□□□□□ -0.8
CASC4-205ENST00000558735 PTDSS2Q9BVG9 487 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 TAPBPLQ9BX59 468 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 A4GALTQ9NPC4 353 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 TMEM45AQ9NWC5 275 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 SLC25A37Q9NYZ2 338 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 MOKQ9UQ07 419 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 ATP23Q9Y6H3 246 aa10.06□□□□□ -0.8
CASC4-205ENST00000558735 A0A096LPI6 279 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 TMEM247A6NEH6 219 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 ELOA3DA6NLF2 546 aaPredicted RBP10.05□□□□□ -0.8
CASC4-205ENST00000558735 UPK3AO75631 287 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 TGDSO95455 350 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 ETS2P15036 469 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 IDH3AP50213 366 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 NUDT6P53370 316 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 ELOA3BQ3SY89 546 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 PAGE3Q5JUK9 113 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 LRIF1Q5T3J3 769 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 BLOC1S3Q6QNY0 202 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 COMTD1Q86VU5 262 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 MSRB3Q8IXL7 192 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 ELOA3Q8NG57 546 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 SLC35B4Q969S0 331 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 SLC25A36Q96CQ1 311 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 KTI12Q96EK9 354 aaPredicted RBP10.05□□□□□ -0.8
CASC4-205ENST00000558735 EBF4Q9BQW3 602 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 PRR14Q9BWN1 585 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 ARMC7Q9H6L4 198 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 FKRPQ9H9S5 495 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 SLCO1B3Q9NPD5 702 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 RASD1Q9Y272 281 aa10.05□□□□□ -0.8
CASC4-205ENST00000558735 IGHV1-18A0A0C4DH31 117 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 ATP6V1G2-DDX39BF2Z307 99 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 H7C417 338 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 NR5A2O00482 541 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 TPST1O60507 370 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 KRT33AO76009 404 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 ZNF432O94892 652 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 AHSA1O95433 338 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 LGI1O95970 557 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 WNT11O96014 354 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 PNMTP11086 282 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 RPS5P46782 204 aaKnown RBP10.04□□□□□ -0.8
CASC4-205ENST00000558735 DSCR9P59020 149 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 FADDQ13158 208 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 SWI5Q1ZZU3 235 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 TBRG1Q3YBR2 411 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 GLIPR1L2Q4G1C9 344 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 C6orf52Q5T4I8 152 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 ANKRD16Q6P6B7 361 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 ABHD12BQ7Z5M8 362 aaPredicted RBP10.04□□□□□ -0.8
CASC4-205ENST00000558735 ZNF525Q8N782 197 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 LSMEM1Q8N8F7 131 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 OR1K1Q8NGR3 316 aa10.04□□□□□ -0.8
CASC4-205ENST00000558735 BBS10Q8TAM1 723 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms