RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 SHISA8B8ZZ34 492 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 VAMP5O95183 116 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 GPIP06744 558 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CHRM4P08173 479 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 PNMTP11086 282 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ATP6V1B1P15313 513 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 RPS4Y1P22090 263 aaKnown RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 IL32P24001 234 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 DNASE1P24855 282 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 DIO1P49895 249 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 AGFG1P52594 562 aaKnown RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 RASGEF1BQ0VAM2 473 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 FOXF2Q12947 444 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 SCARB2Q14108 478 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 MFSD13AQ14CX5 517 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CTU2Q2VPK5 515 aaKnown RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 COX20Q5RI15 118 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ERICH5Q6P6B1 374 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 ABHD12BQ7Z5M8 362 aaPredicted RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 CADM2Q8N3J6 435 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 POC1BQ8TC44 478 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 DNAJA4Q8WW22 397 aaPredicted RBP7.75□□□□□ -1.17
USP3-208ENST00000558285 PYDC1Q8WXC3 89 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 EPYCQ99645 322 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 POTEKPQ9BYX7 375 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TRIM2Q9C040 744 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 C12orf10Q9HB07 376 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TMEM27Q9HBJ8 222 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 CRIM1Q9NZV1 1036 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 TMED7Q9Y3B3 224 aa7.75□□□□□ -1.17
USP3-208ENST00000558285 NOTCH2Q04721 2471 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 UNC79Q9P2D8 2635 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 OR6C65A6NJZ3 312 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 ELOA3DA6NLF2 546 aaPredicted RBP7.74□□□□□ -1.17
USP3-208ENST00000558285 AKAP8O43823 692 aaKnown RBP7.74□□□□□ -1.17
USP3-208ENST00000558285 OR2T1O43869 369 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 NOL3O60936 208 aaKnown RBP7.74□□□□□ -1.17
USP3-208ENST00000558285 AHSA1O95433 338 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 GPX2P18283 190 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 M6PRP20645 277 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 TACR3P29371 465 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 AGTR1P30556 359 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 HOXC12P31275 282 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 IDUAP35475 653 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 UGT2B10P36537 528 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 KIR2DL2P43627 348 aaPredicted RBP7.74□□□□□ -1.17
USP3-208ENST00000558285 OR2B6P58173 313 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 TGFBR3Q03167 851 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 EPS8Q12929 822 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 OXA1LQ15070 435 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 EXOC3L2Q2M3D2 409 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 TRIM16LQ309B1 348 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 NDUFAF6Q330K2 333 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 ELOA3BQ3SY89 546 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 BTLAQ7Z6A9 289 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 ARMC8Q8IUR7 673 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 ELOA3Q8NG57 546 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 TBC1D15Q8TC07 691 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 ISOC1Q96CN7 298 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 BCO1Q9HAY6 547 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 CTPS2Q9NRF8 586 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 RASSF1Q9NS23 344 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 ARMC1Q9NVT9 282 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 TESQ9UGI8 421 aaKnown RBP7.74□□□□□ -1.17
USP3-208ENST00000558285 POMPQ9Y244 141 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 SLC9A8Q9Y2E8 581 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 DSPPQ9NZW4 1301 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 CACNA1CQ13936 2221 aa7.74□□□□□ -1.17
USP3-208ENST00000558285 C17orf51A8MQB3 221 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 NOTOA8MTQ0 251 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 A8MVM7 634 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 CYTIPO60759 359 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 CTAG2O75638 210 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 AQP8O94778 261 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 OPN1LWP04000 364 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 ARAFP10398 606 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 CD1EP15812 388 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 FPR1P21462 350 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 DCKP27707 260 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 RGS8P57771 180 aaPredicted RBP7.73□□□□□ -1.17
USP3-208ENST00000558285 FUT5Q11128 374 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 CAPRIN1Q14444 709 aaKnown RBP7.73□□□□□ -1.17
USP3-208ENST00000558285 TOMM34Q15785 309 aaPredicted RBP7.73□□□□□ -1.17
USP3-208ENST00000558285 KCNJ8Q15842 424 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 MAPK14Q16539 360 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 FAM209AQ5JX71 171 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 SIGIRRQ6IA17 410 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 ZNF836Q6ZNA1 936 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 SERPINA11Q86U17 422 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 P2RY8Q86VZ1 359 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 ZNF295-AS1Q8N0V1 137 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 OR8J3Q8NGG0 315 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 STK35Q8TDR2 534 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 CNOT9Q92600 299 aaKnown RBP7.73□□□□□ -1.17
USP3-208ENST00000558285 KISS1RQ969F8 398 aaPredicted RBP7.73□□□□□ -1.17
USP3-208ENST00000558285 APH1AQ96BI3 265 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 MUCL1Q96DR8 90 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 AURKBQ96GD4 344 aaPredicted RBP7.73□□□□□ -1.17
USP3-208ENST00000558285 CNBD2Q96M20 576 aa7.73□□□□□ -1.17
USP3-208ENST00000558285 QRSL1Q9H0R6 528 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms