RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 UGT2B15P54855 530 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 IQCCQ4KMZ1 466 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 TMEM225Q6GV28 225 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 PIK3C3Q8NEB9 887 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 POP5Q969H6 163 aaKnown RBP22.74■■□□□ 1.23
SMAD6-202ENST00000557916 MOGAT1Q96PD6 335 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 MMADHCQ9H3L0 296 aaPredicted RBP22.74■■□□□ 1.23
SMAD6-202ENST00000557916 NMNAT1Q9HAN9 279 aaPredicted RBP22.74■■□□□ 1.23
SMAD6-202ENST00000557916 IL1RAPQ9NPH3 570 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 MEPEQ9NQ76 525 aaPredicted RBP22.74■■□□□ 1.23
SMAD6-202ENST00000557916 EMC3Q9P0I2 261 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 SLC7A8Q9UHI5 535 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 POMPQ9Y244 141 aa22.74■■□□□ 1.23
SMAD6-202ENST00000557916 IGKV3D-15A0A087WSY6 115 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 LRRN3E7EW58 273 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 M0R082 166 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 DIRAS1O95057 198 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 CGAP01215 116 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 P2RY4P51582 365 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 SLC16A1P53985 500 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 TFF3Q07654 80 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 FLOT2Q14254 428 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 NUFIP2Q7Z417 695 aaKnown RBP22.73■■□□□ 1.23
SMAD6-202ENST00000557916 LUZP2Q86TE4 346 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 PFN4Q8NHR9 129 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 ZNF417Q8TAU3 575 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 ZNF587Q96SQ5 575 aaPredicted RBP22.73■■□□□ 1.23
SMAD6-202ENST00000557916 PIP5K1AQ99755 562 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 KLHL4Q9C0H6 718 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 C12orf49Q9H741 205 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 PLSCR4Q9NRQ2 329 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 SEC14L4Q9UDX3 406 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 MED31Q9Y3C7 131 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 CORINQ9Y5Q5 1042 aa22.73■■□□□ 1.23
SMAD6-202ENST00000557916 MSTNO14793 375 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 VAMP5O95183 116 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 CH25HO95992 272 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 MT-ATP6P00846 226 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 MT-ND1P03886 318 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 H1F0P07305 194 aaKnown RBP22.72■■□□□ 1.23
SMAD6-202ENST00000557916 CD8BP10966 210 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 SLC17A1Q14916 467 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 H1FNTQ75WM6 255 aaPredicted RBP22.72■■□□□ 1.23
SMAD6-202ENST00000557916 GALNT5Q7Z7M9 940 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 GPAT4Q86UL3 456 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 ZDHHC21Q8IVQ6 265 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 SF3B5Q9BWJ5 86 aaKnown RBP22.72■■□□□ 1.23
SMAD6-202ENST00000557916 ASPNQ9BXN1 380 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 OPN3Q9H1Y3 402 aaPredicted RBP22.72■■□□□ 1.23
SMAD6-202ENST00000557916 CHST11Q9NPF2 352 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 RASD1Q9Y272 281 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 B3GALT5Q9Y2C3 310 aa22.72■■□□□ 1.23
SMAD6-202ENST00000557916 AQP12BA6NM10 295 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 GPR171O14626 319 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 CHRNB3Q05901 458 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 ZNF74Q16587 644 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 FAM98BQ52LJ0 330 aaKnown RBP22.71■■□□□ 1.23
SMAD6-202ENST00000557916 ASRGL1Q7L266 308 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 AQP12AQ8IXF9 295 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 ANKRD19PQ9H560 264 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 MAGIXQ9H6Y5 334 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 PLEKHB1Q9UF11 243 aaPredicted RBP22.71■■□□□ 1.23
SMAD6-202ENST00000557916 ICE1Q9Y2F5 2266 aa22.71■■□□□ 1.23
SMAD6-202ENST00000557916 ENO4A6NNW6 628 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 A8MXE2 369 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 GRNP28799 593 aaKnown RBP22.7■■□□□ 1.22
SMAD6-202ENST00000557916 FBXL19-AS1Q494R0 122 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 PIWIL3Q7Z3Z3 882 aaKnown RBP22.7■■□□□ 1.22
SMAD6-202ENST00000557916 SCAIQ8N9R8 606 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 ZNF610Q8N9Z0 462 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 OR9K2Q8NGE7 335 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 LRRC46Q96FV0 321 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 ZNF347Q96SE7 839 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 FKRPQ9H9S5 495 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 NANSQ9NR45 359 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 C20orf141Q9NUB4 165 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 MRPL39Q9NYK5 338 aaKnown RBP22.7■■□□□ 1.22
SMAD6-202ENST00000557916 TESMINQ9Y4I5 508 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 FLVCR1Q9Y5Y0 555 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 CACNA1CQ13936 2221 aa22.7■■□□□ 1.22
SMAD6-202ENST00000557916 A0A1W2PRQ8 180 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 C19orf84I3L1E1 186 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 IGF2P01344 180 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 NQO1P15559 274 aaKnown RBP22.69■■□□□ 1.22
SMAD6-202ENST00000557916 PMS2P3Q13401 168 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 DGCR6Q14129 220 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 KDM8Q8N371 416 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 ADPRHL1Q8NDY3 354 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 ACOT11Q8WXI4 607 aaPredicted RBP22.69■■□□□ 1.22
SMAD6-202ENST00000557916 SGTBQ96EQ0 304 aa22.69■■□□□ 1.22
SMAD6-202ENST00000557916 RBM24Q9BX46 236 aaKnown RBP22.69■■□□□ 1.22
SMAD6-202ENST00000557916 NOSIPQ9Y314 301 aaKnown RBP22.69■■□□□ 1.22
SMAD6-202ENST00000557916 A0A087WUU8 490 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 PIP5K1CO60331 668 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 UMPSP11172 480 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 UQCRC1P31930 480 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 MAGEA2P43356 314 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 LSM11P83369 360 aaKnown RBP eCLIP22.68■■□□□ 1.22
SMAD6-202ENST00000557916 FGD3Q5JSP0 725 aa22.68■■□□□ 1.22
SMAD6-202ENST00000557916 ZNF474Q6S9Z5 364 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms