RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 EDNRAP25101 427 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 P2RY4P51582 365 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 VLDLRP98155 873 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 IL1RL1Q01638 556 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 ST3GAL3Q11203 375 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 LCN8Q6JVE9 175 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 MEX3BQ6ZN04 569 aaKnown RBP12.74□□□□□ -0.37
USP3-205ENST00000557884 GALNT5Q7Z7M9 940 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 CYP4Z1Q86W10 505 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 OFCC1Q8IZS5 231 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 TMEM239Q8WW34 195 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 MCUR1Q96AQ8 359 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 SEPHS2Q99611 448 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 TACO1Q9BSH4 297 aaKnown RBP12.74□□□□□ -0.37
USP3-205ENST00000557884 ZNF426Q9BUY5 554 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 CADM1Q9BY67 442 aaKnown RBP12.74□□□□□ -0.37
USP3-205ENST00000557884 MUC13Q9H3R2 512 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 GP6Q9HCN6 339 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 MEPEQ9NQ76 525 aaPredicted RBP12.74□□□□□ -0.37
USP3-205ENST00000557884 GALNT8Q9NY28 637 aa12.74□□□□□ -0.37
USP3-205ENST00000557884 FAM32AQ9Y421 112 aaKnown RBP12.74□□□□□ -0.37
USP3-205ENST00000557884 SETXQ7Z333 2677 aaKnown RBP12.74□□□□□ -0.37
USP3-205ENST00000557884 DOCK7Q96N67 2140 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 TCRBV5S2A0A599 114 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 ENO4A6NNW6 628 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 ZNF724A8MTY0 619 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 GSC2O15499 205 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 ATP5HO75947 161 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 PRSS23O95084 383 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 SEMG1P04279 462 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 THRBP10828 461 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 NQO1P15559 274 aaKnown RBP12.73□□□□□ -0.37
USP3-205ENST00000557884 RBM34P42696 430 aaKnown RBP12.73□□□□□ -0.37
USP3-205ENST00000557884 SLC16A1P53985 500 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP3-205ENST00000557884 SLC17A1Q14916 467 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 TRAM2Q15035 370 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 PDK3Q15120 406 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 MTX3Q5HYI7 312 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 ZNF787Q6DD87 383 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 TMEM225Q6GV28 225 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 PGM2L1Q6PCE3 622 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 TFAP2EQ6VUC0 442 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 H1FNTQ75WM6 255 aaPredicted RBP12.73□□□□□ -0.37
USP3-205ENST00000557884 MEX3DQ86XN8 651 aaKnown RBP12.73□□□□□ -0.37
USP3-205ENST00000557884 ASB9Q96DX5 294 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 LRRC46Q96FV0 321 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 LRGUKQ96M69 825 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 ASPNQ9BXN1 380 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 SLC19A3Q9BZV2 496 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 PLSCR4Q9NRQ2 329 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 MAN2C1Q9NTJ4 1040 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 NOSIPQ9Y314 301 aaKnown RBP12.73□□□□□ -0.37
USP3-205ENST00000557884 CRYBG3Q68DQ2 2970 aa12.73□□□□□ -0.37
USP3-205ENST00000557884 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 GPR171O14626 319 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 ACOT8O14734 319 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 FZD7O75084 574 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 STAMBPO95630 424 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 MT-ND1P03886 318 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 FABP3P05413 133 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 H1F0P07305 194 aaKnown RBP12.72□□□□□ -0.37
USP3-205ENST00000557884 UMPSP11172 480 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 RHCEP18577 417 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 NTF4P34130 210 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 RASSF2P50749 326 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 FAM27E3Q08E93 113 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 PMS2P3Q13401 168 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 MFSD13AQ14CX5 517 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 ZNF74Q16587 644 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 FGD3Q5JSP0 725 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 CASP12Q6UXS9 341 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 CCDC121Q6ZUS5 278 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 STK32CQ86UX6 486 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 ZNF100Q8IYN0 542 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 LRRC17Q8N6Y2 441 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 PIK3C3Q8NEB9 887 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 OR6S1Q8NH40 331 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 SGTBQ96EQ0 304 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 HS6ST2Q96MM7 605 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 ZNF385AQ96PM9 386 aaKnown RBP12.72□□□□□ -0.37
USP3-205ENST00000557884 PIP5K1AQ99755 562 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 TRIM15Q9C019 465 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 NMNAT1Q9HAN9 279 aaPredicted RBP12.72□□□□□ -0.37
USP3-205ENST00000557884 C20orf141Q9NUB4 165 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 MRPL39Q9NYK5 338 aaKnown RBP12.72□□□□□ -0.37
USP3-205ENST00000557884 PRSS50Q9UI38 385 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 RASD1Q9Y272 281 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 MED31Q9Y3C7 131 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 CORINQ9Y5Q5 1042 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 CELSR2Q9HCU4 2923 aa12.72□□□□□ -0.37
USP3-205ENST00000557884 SERPINI2O75830 405 aa12.71□□□□□ -0.37
USP3-205ENST00000557884 HPRP00739 348 aa12.71□□□□□ -0.37
USP3-205ENST00000557884 MT-ATP6P00846 226 aa12.71□□□□□ -0.37
USP3-205ENST00000557884 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
USP3-205ENST00000557884 COX6B1P14854 86 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms