RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 C3orf49Q96BT1 292 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 SORCS2Q96PQ0 1159 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 ALKBH3Q96Q83 286 aaPredicted RBP11.15□□□□□ -0.62
RDH11-211ENST00000557726 SLC38A2Q96QD8 506 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 ARMC7Q9H6L4 198 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 WDR55Q9H6Y2 383 aaPredicted RBP11.15□□□□□ -0.62
RDH11-211ENST00000557726 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 PRDM4Q9UKN5 801 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 KCNS2Q9ULS6 477 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 ZNF443Q9Y2A4 671 aaPredicted RBP11.15□□□□□ -0.62
RDH11-211ENST00000557726 GPR45Q9Y5Y3 372 aa11.15□□□□□ -0.62
RDH11-211ENST00000557726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.15□□□□□ -0.629e-7■■□□□ 12.6
RDH11-211ENST00000557726 STAB1Q9NY15 2570 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 A0A096LPI6 279 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 IGHV1-18A0A0C4DH31 117 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 LOC100289279A0A1B0GTE1 492 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 OR6C65A6NJZ3 312 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 HDAC3O15379 428 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 FRS3O43559 492 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 SLC22A3O75751 556 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 AHSA1O95433 338 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 APEHP13798 732 aaKnown RBP11.14□□□□□ -0.63
RDH11-211ENST00000557726 IDO1P14902 403 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 GTF2E2P29084 291 aaKnown RBP11.14□□□□□ -0.63
RDH11-211ENST00000557726 SERPINF1P36955 418 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 DSTNP60981 165 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 TUBA1BP68363 451 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 TUBA4AP68366 448 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 LGALS3BPQ08380 585 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 ZSWIM7Q19AV6 140 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 MST1LQ2TV78 715 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 RPS26P11Q5JNZ5 115 aaPredicted RBP11.14□□□□□ -0.63
RDH11-211ENST00000557726 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 FAM166AQ6J272 317 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 CREB3L2Q70SY1 520 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 TUBA1AQ71U36 451 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 CLIP4Q8N3C7 705 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 SLC25A36Q96CQ1 311 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 RMND5AQ9H871 391 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 SLC6A13Q9NSD5 602 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 RASD1Q9Y272 281 aa11.14□□□□□ -0.63
RDH11-211ENST00000557726 MXRA5Q9NR99 2828 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 A0A096LPE4 126 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 A0A1W2PPZ6 126 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 B9A039 149 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 NDUFS8O00217 210 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 NR5A2O00482 541 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 TFPTP0C1Z6 253 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 PRG2P13727 222 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 SRD5A1P18405 259 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 PAX7P23759 505 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 NR4A2P43354 598 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 MAPK11Q15759 364 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 PDCD4Q53EL6 469 aaKnown RBP11.13□□□□□ -0.63
RDH11-211ENST00000557726 RNF220Q5VTB9 566 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 ANKRD16Q6P6B7 361 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 ARIH2OSQ8N7S6 290 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 ANKS4BQ8N8V4 417 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 MGARPQ8TDB4 240 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 STK35Q8TDR2 534 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 SLC38A5Q8WUX1 472 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 BCL2L2Q92843 193 aaPredicted RBP11.13□□□□□ -0.63
RDH11-211ENST00000557726 TMEM19Q96HH6 336 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 FOXN4Q96NZ1 517 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 KATNB1Q9BVA0 655 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 SPATA9Q9BWV2 254 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 PARD6BQ9BYG5 372 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 TPT1P8Q9HAU6 139 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 MYOZ1Q9NP98 299 aaPredicted RBP11.13□□□□□ -0.63
RDH11-211ENST00000557726 CA10Q9NS85 328 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 THAP1Q9NVV9 213 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 THUMPD1Q9NXG2 353 aaKnown RBP11.13□□□□□ -0.63
RDH11-211ENST00000557726 RPS6KB2Q9UBS0 482 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 IFT52Q9Y366 437 aa11.13□□□□□ -0.63
RDH11-211ENST00000557726 DSPPQ9NZW4 1301 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 ANK3Q12955 4377 aaKnown RBP11.12□□□□□ -0.63
RDH11-211ENST00000557726 A0A0G2JPF8 293 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 LOC390937A0A1W2PQ73 354 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 VSTM5A8MXK1 200 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 VWC2LB2RUY7 222 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 HNRNPCL2B2RXH8 293 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 HNRNPCL3B7ZW38 293 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 HNRNPCL1O60812 293 aaKnown RBP11.12□□□□□ -0.63
RDH11-211ENST00000557726 UPK3AO75631 287 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 OR4A8P0C604 315 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 ZCCHC18P0CG32 403 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 HNRNPCL4P0DMR1 293 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 ZNF43P17038 809 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 HNF1AP20823 631 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 IGFBP5P24593 272 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 RPS5P46782 204 aaKnown RBP11.12□□□□□ -0.63
RDH11-211ENST00000557726 P2RY4P51582 365 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 MVDP53602 400 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 CLDN17P56750 224 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 IL1RL1Q01638 556 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 ROR2Q01974 943 aaKnown RBP11.12□□□□□ -0.63
RDH11-211ENST00000557726 NAAAQ02083 359 aa11.12□□□□□ -0.63
RDH11-211ENST00000557726 C1DQ13901 141 aaKnown RBP11.12□□□□□ -0.63
RDH11-211ENST00000557726 GTDC1Q4AE62 458 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms