RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 KRT71Q3SY84 523 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 LIN52Q52LA3 116 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 FAM120AOSQ5T036 256 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 WDR93Q6P2C0 686 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 CADM2Q8N3J6 435 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 ANKS4BQ8N8V4 417 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 MAGEE2Q8TD90 523 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-224ENST00000557713 VRK1Q99986 396 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-224ENST00000557713 MYOZ1Q9NP98 299 aaPredicted RBP13.87□□□□□ -0.19
SCFD1-224ENST00000557713 ADPRHL2Q9NX46 363 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 KCNS2Q9ULS6 477 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 CHST2Q9Y4C5 530 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 ARFGEF3Q5TH69 2177 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 OR6C65A6NJZ3 312 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 TMEM229AB2RXF0 380 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF587BE7ETH6 402 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 RGS16O15492 202 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-224ENST00000557713 FRS3O43559 492 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 UPK3AO75631 287 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 PDE5AO76074 875 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 IGLV1-44P01699 117 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 OR4A8P0C604 315 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 APEHP13798 732 aaKnown RBP13.86□□□□□ -0.19
SCFD1-224ENST00000557713 HOXB1P14653 301 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-224ENST00000557713 SRD5A1P18405 259 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 UBE2NP61088 152 aaKnown RBP13.86□□□□□ -0.19
SCFD1-224ENST00000557713 COPZ1P61923 177 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 NAAAQ02083 359 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 BST1Q10588 318 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 TNFAIP8L3Q5GJ75 292 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 RNF220Q5VTB9 566 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 C1orf140Q5VVS0 124 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 NIPAL3Q6P499 406 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 IL17RELQ6ZVW7 336 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 SLC46A3Q7Z3Q1 461 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 CLIP4Q8N3C7 705 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 MREGQ8N565 214 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 FAM169BQ8N8A8 192 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 SLC38A5Q8WUX1 472 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 C3orf49Q96BT1 292 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF317Q96PQ6 595 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-224ENST00000557713 KCNS3Q9BQ31 491 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 LINC00470Q9BZP3 86 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 NELFAQ9H3P2 528 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 PLK3Q9H4B4 646 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 WDR55Q9H6Y2 383 aaPredicted RBP13.86□□□□□ -0.19
SCFD1-224ENST00000557713 CHODLQ9H9P2 273 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 CALML5Q9NZT1 146 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 P2RX2Q9UBL9 471 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 RASD1Q9Y272 281 aa13.86□□□□□ -0.19
SCFD1-224ENST00000557713 ANK2Q01484 3957 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 A0A096LPI6 279 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 FTCDNL1E5RQL4 147 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 RFXANKO14593 260 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 CECR9P0C854 216 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 ETFAP13804 333 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF23P17027 643 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 CALCRP30988 508 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 TUBA1BP68363 451 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 TUBA4AP68366 448 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 ZSWIM7Q19AV6 140 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 TUBA1AQ71U36 451 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 GLB1L3Q8NCI6 653 aaPredicted RBP13.85□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF540Q8NDQ6 660 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 MFSD8Q8NHS3 518 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 STK35Q8TDR2 534 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 ALKBH3Q96Q83 286 aaPredicted RBP13.85□□□□□ -0.19
SCFD1-224ENST00000557713 ZBTB18Q99592 522 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 C19orf24Q9BVV8 132 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 SPATA9Q9BWV2 254 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 SEC61A2Q9H9S3 476 aa13.85□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF443Q9Y2A4 671 aaPredicted RBP13.85□□□□□ -0.19
SCFD1-224ENST00000557713 MALRD1Q5VYJ5 2156 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 A0A096LPE4 126 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 A0A0G2JPF8 293 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 A0A1W2PPZ6 126 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 HNRNPCL2B2RXH8 293 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 HNRNPCL3B7ZW38 293 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 RPL36A-HNRNPH2H7BZ11 118 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 HNRNPCL1O60812 293 aaKnown RBP13.84□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF432O94892 652 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 TGFAP01135 160 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 IGKV3-15P01624 115 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 IL6P05231 212 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 BCHEP06276 602 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 ZCCHC18P0CG32 403 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 HNRNPCL4P0DMR1 293 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 NCF2P19878 526 aaPredicted RBP13.84□□□□□ -0.19
SCFD1-224ENST00000557713 EPHA3P29320 983 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 CRATP43155 626 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 PPOXP50336 477 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 IDH3GP51553 393 aaPredicted RBP13.84□□□□□ -0.19
SCFD1-224ENST00000557713 CRISP3P54108 245 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
SCFD1-224ENST00000557713 HGFACQ04756 655 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 EGR4Q05215 589 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 LARS2Q15031 903 aaKnown RBP13.84□□□□□ -0.19
SCFD1-224ENST00000557713 CARTPTQ16568 116 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 PRAMEF8Q5VWM4 474 aa13.84□□□□□ -0.19
SCFD1-224ENST00000557713 PRAMEF7Q5VXH5 474 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms