RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 IDH3GP51553 393 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 IFFO1Q0D2I5 559 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 NPRL3Q12980 569 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 PRAMEF8Q5VWM4 474 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 PRAMEF7Q5VXH5 474 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 ATG16L1Q676U5 607 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 LRRC74BQ6ZQY2 392 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF621Q6ZSS3 439 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 CREB3L2Q70SY1 520 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 SPATA21Q7Z572 469 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 EPHX4Q8IUS5 362 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 CDK20Q8IZL9 346 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 PMM1Q92871 262 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 TESCQ96BS2 214 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 SLC25A36Q96CQ1 311 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 ZNF837Q96EG3 531 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 TRNT1Q96Q11 434 aaKnown RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 KATNB1Q9BVA0 655 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 TAPBPLQ9BX59 468 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 ROPN1BQ9BZX4 212 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 PLK3Q9H4B4 646 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 ROPN1Q9HAT0 212 aaPredicted RBP12.21□□□□□ -0.45
SLIRP-210ENST00000557431 PNPOQ9NVS9 261 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 RAB21Q9UL25 225 aa12.21□□□□□ -0.45
SLIRP-210ENST00000557431 TMEM129A0AVI4 362 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 BCHEP06276 602 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 DAOP14920 347 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 LBPP18428 481 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 FKBP2P26885 142 aaKnown RBP12.2□□□□□ -0.46
SLIRP-210ENST00000557431 SRP14P37108 136 aaKnown RBP12.2□□□□□ -0.46
SLIRP-210ENST00000557431 PPOXP50336 477 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 CLDN17P56750 224 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 ABCE1P61221 599 aaKnown RBP12.2□□□□□ -0.46
SLIRP-210ENST00000557431 HOXC5Q00444 222 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 ROR2Q01974 943 aaKnown RBP12.2□□□□□ -0.46
SLIRP-210ENST00000557431 MSMPQ1L6U9 139 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 GTDC1Q4AE62 458 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 CARM1Q86X55 608 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 CMIPQ8IY22 773 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 CLIP4Q8N3C7 705 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 MREGQ8N565 214 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 VPS37AQ8NEZ2 397 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 OIT3Q8WWZ8 545 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 CCDC115Q96NT0 180 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 PANX1Q96RD7 426 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 SF3B5Q9BWJ5 86 aaKnown RBP12.2□□□□□ -0.46
SLIRP-210ENST00000557431 NARFLQ9H6Q4 476 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 CRNNQ9UBG3 495 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-210ENST00000557431 CHST2Q9Y4C5 530 aa12.2□□□□□ -0.46
SLIRP-210ENST00000557431 FAAHO00519 579 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 TCF21O43680 179 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 SERPINE1P05121 402 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 PGRP06401 933 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 DBIP07108 87 aaKnown RBP12.19□□□□□ -0.46
SLIRP-210ENST00000557431 PNMTP11086 282 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 ETFAP13804 333 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 BGNP21810 368 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 CBLP22681 906 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 SLC1A6P48664 564 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 ARF1P84077 181 aaKnown RBP12.19□□□□□ -0.46
SLIRP-210ENST00000557431 SQLEQ14534 574 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 EFNB3Q15768 340 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 ADRM1Q16186 407 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 ZSWIM7Q19AV6 140 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 SMU1Q2TAY7 513 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 C1orf140Q5VVS0 124 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 LIPNQ5VXI9 398 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 KRT80Q6KB66 452 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 ABHD12BQ7Z5M8 362 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-210ENST00000557431 SERPINA11Q86U17 422 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 OR52P1PQ8NH57 321 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 DOK1Q99704 481 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 TMEM109Q9BVC6 243 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 MTHFD2LQ9H903 347 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-210ENST00000557431 LPAR2Q9HBW0 351 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 NOX3Q9HBY0 568 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 DYNLRB1Q9NP97 96 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 MYOZ1Q9NP98 299 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-210ENST00000557431 TMEFF2Q9UIK5 374 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-210ENST00000557431 BTNL2Q9UIR0 455 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 ZNF443Q9Y2A4 671 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-210ENST00000557431 RAP2CQ9Y3L5 183 aa12.19□□□□□ -0.46
SLIRP-210ENST00000557431 ARPC4-TTLL3A0A0A6YYG9 625 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 IGHV2OR16-5A0A0B4J2B6 119 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 CDHR4A6H8M9 788 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 A8MVM7 634 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 VENTXO95231 258 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 IGLV1-44P01699 117 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 ADRA2AP08913 450 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 MYZAPP0CAP1 466 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 NCF2P19878 526 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-210ENST00000557431 TCN1P20061 433 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-210ENST00000557431 NPR2P20594 1047 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 RPS5P46782 204 aaKnown RBP12.18□□□□□ -0.46
SLIRP-210ENST00000557431 CAPZA2P47755 286 aa12.18□□□□□ -0.46
SLIRP-210ENST00000557431 RPL14P50914 215 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms