RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PDGFAP04085 211 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 GIPP09681 153 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CASP3P42574 277 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 WDR73Q6P4I2 378 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 SLC22A24Q8N4F4 322 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 JOSD2Q8TAC2 188 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 DVL3Q92997 716 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 BOD1Q96IK1 185 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 NOCTQ9UK39 431 aaKnown RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 MAFBQ9Y5Q3 323 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 NSG1A0A0A6YYJ2 146 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 A0A1W2PPK0 400 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 COX19Q49B96 90 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 GSX2Q9BZM3 304 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 ZDHHC18Q9NUE0 388 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 GALPQ9UBC7 116 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 A6NCN8 305 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 H3BSH0 61 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 LGI3Q8N145 548 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 SLC6A20Q9NP91 592 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 OR14J1Q9UGF5 321 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 OR52A1Q9UKL2 312 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 OSGIN2Q9Y236 505 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF90Q03938 601 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 A0A1B0GTW7 788 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 RCCD1A6NED2 376 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 FBXO48Q5FWF7 155 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 TAC4Q86UU9 113 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 LSRQ86X29 649 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CDC20BQ86Y33 519 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 BOLLQ8N9W6 283 aaKnown RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 OR10Q1Q8NGQ4 319 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 LRRC3CA6NJW4 275 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 F5H5K5 113 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 SIX3O95343 332 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 NKX2-5P52952 324 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CDK5R2Q13319 367 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 FAM110CQ1W6H9 321 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 OR4C11Q6IEV9 310 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CSNK1A1LQ8N752 337 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 LPPQ93052 612 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 NUDT22Q9BRQ3 303 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 OR51B5Q9H339 312 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 ENTPD2Q9Y5L3 495 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 ANKRD36CQ5JPF3 1778 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 TRIM77I1YAP6 450 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 FZD7O75084 574 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 NAGAP17050 411 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 SLC36A2Q495M3 483 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 ARSIQ5FYB1 569 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 SLC5A8Q8N695 610 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 IL22RA1Q8N6P7 574 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 GPR26Q8NDV2 337 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 PRR11Q96HE9 360 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 TOLLIPQ9H0E2 274 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 PDZD7Q9H5P4 517 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 SELENOWP63302 87 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 RING1Q06587 406 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 GALNT2Q10471 571 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 DGKZQ13574 1117 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 PDE7AQ13946 482 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 IGFN1Q86VF2 1251 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 PARP16Q8N5Y8 322 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CLEC1AQ8NC01 280 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 OR5K2Q8NHB8 316 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 RHOXF1Q8NHV9 184 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 SERINC2Q96SA4 455 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 ELOVL3Q9HB03 270 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 FBRSL1Q9HCM7 1045 aaKnown RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 AGPAT4Q9NRZ5 378 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 HERVK_113P61574 105 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PPP1CBP62140 327 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 CCDC116Q8IYX3 515 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SLC39A13Q96H72 371 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 BARHL1Q9BZE3 327 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 LMAN1LQ9HAT1 526 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 BCO1Q9HAY6 547 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 C1GALT1Q9NS00 363 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 EXOGQ9Y2C4 368 aaKnown RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 RHBDD3Q9Y3P4 386 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM218A2RU14 115 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 SELEP16581 610 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 GORASP2Q9H8Y8 452 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 KIAA1456Q9P272 454 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 ALPK2Q86TB3 2170 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PRAMEF27A3QJZ7 478 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 WNT10BO00744 389 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 PRAMEF9Q5VWM5 478 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 OR10J5Q8NHC4 309 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 VRTNQ9H8Y1 702 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 HES2Q9Y543 173 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TXNDC12O95881 172 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 CST2P09228 141 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 POU3F3P20264 500 aaPredicted RBP8.26□□□□□ -1.09
SYNE3-205ENST00000557275 CNR2P34972 360 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM151BQ8IW70 566 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 AKR1E2Q96JD6 320 aa8.26□□□□□ -1.09
SYNE3-205ENST00000557275 IFT22Q9H7X7 185 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms