RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 DPF1Q92782 380 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 APH1AQ96BI3 265 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 KLHL29Q96CT2 875 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 CERS2Q96G23 380 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 UBXN10Q96LJ8 280 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ANKRD27Q96NW4 1050 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 DUX5Q96PT3 197 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ZNF300Q96RE9 604 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 KCNS3Q9BQ31 491 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 KATNB1Q9BVA0 655 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ZNF442Q9H7R0 627 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 OBP2BQ9NPH6 170 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 PPANQ9NQ55 473 aaKnown RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 EMC3Q9P0I2 261 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 OPTCQ9UBM4 332 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 MALT1Q9UDY8 824 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 MID2Q9UJV3 735 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 C19orf53Q9UNZ5 99 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 EXPH5Q8NEV8 1989 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 PPIAL4EA0A075B759 164 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 PPIAL4CA0A0B4J2A2 164 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 C5orf63A6NC05 138 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 TTC36A6NLP5 189 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 PPIAL4DF5H284 164 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 hCG_2039718K7EN88 272 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 KIF2AO00139 706 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 GPR171O14626 319 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 SYNGR3O43761 229 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 GMFGO60234 142 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 MRPL33O75394 65 aaKnown RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 MPZL1O95297 269 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 IPO7O95373 1038 aaKnown RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 IGHV3-9P01782 118 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 KRT14P02533 472 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 ADRA2AP08913 450 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 PPIAL4FP0DN26 164 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 CD1DP15813 335 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 SELEP16581 610 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 NPR2P20594 1047 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 TYK2P29597 1187 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 LCN1P31025 176 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 SLC6A9P48067 706 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 RFX3P48380 749 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 TERF1P54274 439 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 FOXG1P55316 489 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 TRADDQ15628 312 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 GRAMD1BQ3KR37 738 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 GLE1Q53GS7 698 aaKnown RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 ZNF311Q5JNZ3 666 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 DCAF12L2Q5VW00 463 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 RUSC1-AS1Q66K80 236 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 REP15Q6BDI9 236 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 FAM180BQ6P0A1 224 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 METTL2BQ6P1Q9 378 aaKnown RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 SYT10Q6XYQ8 523 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 ISCA2Q86U28 154 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 TEX9Q8N6V9 391 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 KIR3DL3Q8N743 410 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 OR7G2Q8NG99 324 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 OR4F5Q8NH21 305 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 B4GALNT2Q8NHY0 566 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 UBTD2Q8WUN7 234 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 DDB2Q92466 427 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 SLC38A2Q96QD8 506 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 BBS4Q96RK4 519 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 FAIM2Q9BWQ8 316 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 KRTAP1-5Q9BYS1 174 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 COQ10BQ9H8M1 238 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 C3orf14Q9HBI5 128 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 PLAC1Q9HBJ0 212 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 MOV10Q9HCE1 1003 aaKnown RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 Q9N2J8 555 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 PLEK2Q9NYT0 353 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 UTS2RQ9UKP6 389 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 NUP50Q9UKX7 468 aa4.01□□□□□ -1.77
SCFD1-223ENST00000557076 NOSIPQ9Y314 301 aaKnown RBP4.01□□□□□ -1.77
SCFD1-223ENST00000557076 IGHV3-15A0A0B4J1V0 119 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 IGHV1-18A0A0C4DH31 117 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 A0A1W2PQD3 144 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 SH3PXD2BA1X283 911 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 CLPSL1A2RUU4 121 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 G3V4G9 280 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 UPK1AO00322 258 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 PIP5K1BO14986 540 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 PPIHO43447 177 aaKnown RBP4□□□□□ -1.77
SCFD1-223ENST00000557076 COQ9O75208 318 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 CLPXO76031 633 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 NDUFA7O95182 113 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 PSMG1O95456 288 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 OXSR1O95747 527 aaPredicted RBP4□□□□□ -1.77
SCFD1-223ENST00000557076 NGFP01138 241 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 IGKV1D-16P01601 117 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 IGLV1-44P01699 117 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 FGGP02679 453 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 HPGDP15428 266 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 HOXB6P17509 224 aaKnown RBP4□□□□□ -1.77
SCFD1-223ENST00000557076 DDCP20711 480 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 OMGP23515 440 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 MPGP29372 298 aa4□□□□□ -1.77
SCFD1-223ENST00000557076 SLC7A1P30825 629 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms