RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 V9GYY5 206 aaPredicted RBP12.85□□□□□ -0.35
CHD8-211ENST00000556833 CRYAAP02489 173 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 HNF1AP20823 631 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 IDH3GP51553 393 aaPredicted RBP12.84□□□□□ -0.35
CHD8-211ENST00000556833 P2RY4P51582 365 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 IL1RL1Q01638 556 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 ROR2Q01974 943 aaKnown RBP12.84□□□□□ -0.35
CHD8-211ENST00000556833 NAAAQ02083 359 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 NPRL3Q12980 569 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 GTDC1Q4AE62 458 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 C1orf140Q5VVS0 124 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 CREB3L2Q70SY1 520 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 ABHD12BQ7Z5M8 362 aaPredicted RBP12.84□□□□□ -0.35
CHD8-211ENST00000556833 CLIP4Q8N3C7 705 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 TRIML2Q8N7C3 387 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 OR52P1PQ8NH57 321 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 OIT3Q8WWZ8 545 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 BCL2L2Q92843 193 aaPredicted RBP12.84□□□□□ -0.35
CHD8-211ENST00000556833 ZIM3Q96PE6 472 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 SNX18Q96RF0 628 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 ADAM19Q9H013 955 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
CHD8-211ENST00000556833 MTHFD2LQ9H903 347 aaPredicted RBP12.84□□□□□ -0.35
CHD8-211ENST00000556833 ZNF443Q9Y2A4 671 aaPredicted RBP12.84□□□□□ -0.35
CHD8-211ENST00000556833 LOC390937A0A1W2PQ73 354 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 CDHR4A6H8M9 788 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 LYNX1G3V0Z9 82 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 hCG_2039718K7EN88 272 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 SDHDO14521 159 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 PGRP06401 933 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 LYNX1P0DP58 116 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 KITP10721 976 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 CBLP22681 906 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 THBS4P35443 961 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 ACAA2P42765 397 aaKnown RBP12.83□□□□□ -0.36
CHD8-211ENST00000556833 CRATP43155 626 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 RPS5P46782 204 aaKnown RBP12.83□□□□□ -0.36
CHD8-211ENST00000556833 CAPZA2P47755 286 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 ANXA11P50995 505 aaKnown RBP12.83□□□□□ -0.36
CHD8-211ENST00000556833 CLDN17P56750 224 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 COPZ1P61923 177 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 CCNIQ14094 377 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 DPY19L1Q2PZI1 675 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 LIN52Q52LA3 116 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 ANKRD16Q6P6B7 361 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 SPATA21Q7Z572 469 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 SERPINA11Q86U17 422 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 EPHX4Q8IUS5 362 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 LRRC34Q8IZ02 419 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 KATNB1Q9BVA0 655 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 SF3B5Q9BWJ5 86 aaKnown RBP12.83□□□□□ -0.36
CHD8-211ENST00000556833 ROPN1BQ9BZX4 212 aaPredicted RBP12.83□□□□□ -0.36
CHD8-211ENST00000556833 TPK1Q9H3S4 243 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 WDR55Q9H6Y2 383 aaPredicted RBP12.83□□□□□ -0.36
CHD8-211ENST00000556833 ROPN1Q9HAT0 212 aaPredicted RBP12.83□□□□□ -0.36
CHD8-211ENST00000556833 KCNK9Q9NPC2 374 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 AIG1Q9NVV5 245 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 P2RX2Q9UBL9 471 aa12.83□□□□□ -0.36
CHD8-211ENST00000556833 ZNF503-AS2A6NEH8 195 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 A8MVM7 634 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 B9A039 149 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 NDUFS8O00217 210 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 FAAHO00519 579 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 RFXANKO14593 260 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 RGS16O15492 202 aaPredicted RBP12.82□□□□□ -0.36
CHD8-211ENST00000556833 DAOP14920 347 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 ZNF23P17027 643 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 APEX1P27695 318 aaKnown RBP12.82□□□□□ -0.36
CHD8-211ENST00000556833 EPHA3P29320 983 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 ARF1P84077 181 aaKnown RBP12.82□□□□□ -0.36
CHD8-211ENST00000556833 HGFACQ04756 655 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 STX3Q13277 289 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 TRIP10Q15642 601 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 AP1ARQ63HQ0 302 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 NXNQ6DKJ4 435 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 KRT80Q6KB66 452 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 RINLQ6ZS11 566 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 CDK20Q8IZL9 346 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 ANKRD42Q8N9B4 389 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 AENQ8WTP8 325 aaKnown RBP12.82□□□□□ -0.36
CHD8-211ENST00000556833 ZNF837Q96EG3 531 aaPredicted RBP12.82□□□□□ -0.36
CHD8-211ENST00000556833 ZBTB18Q99592 522 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 NARFLQ9H6Q4 476 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 MEAF6Q9HAF1 191 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 DYNLRB1Q9NP97 96 aa12.82□□□□□ -0.36
CHD8-211ENST00000556833 OR6C65A6NJZ3 312 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 RGS9O75916 674 aaPredicted RBP12.81□□□□□ -0.36
CHD8-211ENST00000556833 AHSA1O95433 338 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 ANP32DO95626 131 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 STAMBPO95630 424 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 PNMTP11086 282 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 GTF2E2P29084 291 aaKnown RBP12.81□□□□□ -0.36
CHD8-211ENST00000556833 SRP14P37108 136 aaKnown RBP12.81□□□□□ -0.36
CHD8-211ENST00000556833 BST1Q10588 318 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 MPP2Q14168 576 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 CARD17Q5XLA6 110 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 ZNF440Q8IYI8 595 aa12.81□□□□□ -0.36
CHD8-211ENST00000556833 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHD8-211ENST00000556833 KTI12Q96EK9 354 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms