RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 TBRG1Q3YBR2 411 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 C1orf140Q5VVS0 124 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 PRAMEF8Q5VWM4 474 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 PRAMEF7Q5VXH5 474 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 CYB5R2Q6BCY4 276 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 NXNQ6DKJ4 435 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 MSANTD1Q6ZTZ1 278 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 CREB3L2Q70SY1 520 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 CLIP4Q8N3C7 705 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 OR1K1Q8NGR3 316 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM158Q8WZ71 300 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 C3orf49Q96BT1 292 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 SLC38A2Q96QD8 506 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 SPATA9Q9BWV2 254 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 CACYBPQ9HB71 228 aaKnown RBP16.42■□□□□ 0.22
CDKN3-209ENST00000556102 THUMPD1Q9NXG2 353 aaKnown RBP16.42■□□□□ 0.22
CDKN3-209ENST00000556102 RASD1Q9Y272 281 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 FKBP7Q9Y680 259 aa16.42■□□□□ 0.22
CDKN3-209ENST00000556102 IGHV1-18A0A0C4DH31 117 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM229AB2RXF0 380 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 NPIPB7O75200 414 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 LY6HO94772 140 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 LGI1O95970 557 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 IGHV4-31P0DP07 118 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 MST1LQ2TV78 715 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 RPS26P11Q5JNZ5 115 aaPredicted RBP16.41■□□□□ 0.22
CDKN3-209ENST00000556102 STK35Q8TDR2 534 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 ZBTB9Q96C00 473 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM19Q96HH6 336 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 MAELQ96JY0 434 aaKnown RBP16.41■□□□□ 0.22
CDKN3-209ENST00000556102 ZNF317Q96PQ6 595 aaPredicted RBP16.41■□□□□ 0.22
CDKN3-209ENST00000556102 ALKBH3Q96Q83 286 aaPredicted RBP16.41■□□□□ 0.22
CDKN3-209ENST00000556102 KCNS3Q9BQ31 491 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 KATNB1Q9BVA0 655 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 ARMC7Q9H6L4 198 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 RMND5AQ9H871 391 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 ZIM2Q9NZV7 527 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 LPAR3Q9UBY5 353 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 ZNF232Q9UNY5 417 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 IFT52Q9Y366 437 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 CHST2Q9Y4C5 530 aa16.41■□□□□ 0.22
CDKN3-209ENST00000556102 ARPC4-TTLL3A0A0A6YYG9 625 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 A0A0G2JPF8 293 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM120BA0PK00 339 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 TMEM247A6NEH6 219 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 HNRNPCL2B2RXH8 293 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 HNRNPCL3B7ZW38 293 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 HNRNPCL1O60812 293 aaKnown RBP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 AHSA1O95433 338 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 CRYAAP02489 173 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 HNRNPCL4P0DMR1 293 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 ZNF16P17020 682 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 PDLIM4P50479 330 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 UBE2NP61088 152 aaKnown RBP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 SNRPD2P62316 118 aaKnown RBP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 LSM11P83369 360 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 LGALS3BPQ08380 585 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 GTDC1Q4AE62 458 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 ATG16L1Q676U5 607 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 NIPAL3Q6P499 406 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 SERPINA11Q86U17 422 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 EPHX4Q8IUS5 362 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 MAGEE2Q8TD90 523 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 BCL2L2Q92843 193 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 ITCHQ96J02 903 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 SORCS2Q96PQ0 1159 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 BEX2Q9BXY8 128 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 SDR39U1Q9NRG7 319 aaPredicted RBP16.4■□□□□ 0.22
CDKN3-209ENST00000556102 RAB21Q9UL25 225 aa16.4■□□□□ 0.22
CDKN3-209ENST00000556102 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.224e-9■■■■■ 29.4
CDKN3-209ENST00000556102 VWC2LB2RUY7 222 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 FTCDNL1E5RQL4 147 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 NDUFS8O00217 210 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 GZMKP49863 264 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 C3orf36Q3SXR2 165 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 SLC9B1Q4ZJI4 515 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 LINGO2Q7L985 606 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 MFSD8Q8NHS3 518 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 MGARPQ8TDB4 240 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 SLC35B4Q969S0 331 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 LINC00470Q9BZP3 86 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 MOV10Q9HCE1 1003 aaKnown RBP16.39■□□□□ 0.21
CDKN3-209ENST00000556102 CA10Q9NS85 328 aa16.39■□□□□ 0.21
CDKN3-209ENST00000556102 CRNNQ9UBG3 495 aaPredicted RBP16.39■□□□□ 0.21
CDKN3-209ENST00000556102 B9A039 149 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 PHF1O43189 567 aaPredicted RBP16.38■□□□□ 0.21
CDKN3-209ENST00000556102 LMX1BO60663 402 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 UPK3AO75631 287 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 PDE5AO76074 875 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 PNMTP11086 282 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 HOXB1P14653 301 aaPredicted RBP16.38■□□□□ 0.21
CDKN3-209ENST00000556102 SERPINF1P36955 418 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 SH3BGRP55822 239 aaPredicted RBP16.38■□□□□ 0.21
CDKN3-209ENST00000556102 NAAAQ02083 359 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 ZNF311Q5JNZ3 666 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 C6orf10Q5SRN2 563 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 ANKRD16Q6P6B7 361 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 SLC46A3Q7Z3Q1 461 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 VPS33AQ96AX1 596 aa16.38■□□□□ 0.21
CDKN3-209ENST00000556102 SLC25A36Q96CQ1 311 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms