RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 OR6S1Q8NH40 331 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 OR4K13Q8NH42 304 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 DACH2Q96NX9 599 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 CHCHD6Q9BRQ6 235 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 KATNB1Q9BVA0 655 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 KLK13Q9UKR3 277 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 CAB39Q9Y376 341 aaPredicted RBP13.34□□□□□ -0.27
VPS33B-205ENST00000556096 ADAM18Q9Y3Q7 739 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 NSG1A0A0A6YYJ2 146 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 LOC100506127A0A0U1RQW1 187 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 TMEM72A0PK05 275 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 ZC3H12DA2A288 527 aaKnown RBP13.33□□□□□ -0.27
VPS33B-205ENST00000556096 INHBBP09529 407 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 PRKCAP17252 672 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 PSMA1P25786 263 aaKnown RBP13.33□□□□□ -0.27
VPS33B-205ENST00000556096 APOBEC1P41238 236 aaKnown RBP13.33□□□□□ -0.27
VPS33B-205ENST00000556096 RPS5P46782 204 aaKnown RBP13.33□□□□□ -0.27
VPS33B-205ENST00000556096 ERVK-25P63136 954 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 EMC4Q5J8M3 183 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 FAM69AQ5T7M9 428 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 TMEM81Q6P7N7 255 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 MAMDC2Q7Z304 686 aaPredicted RBP13.33□□□□□ -0.27
VPS33B-205ENST00000556096 FAM122BQ7Z309 247 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 NANOGNBQ7Z5D8 188 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 ARMC10Q8N2F6 343 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 SDR9C7Q8NEX9 313 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 OR10G3Q8NGC4 313 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 GATAD2BQ8WXI9 593 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 TM9SF4Q92544 642 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 PTDSS2Q9BVG9 487 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 NMNAT2Q9BZQ4 307 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 METTL7AQ9H8H3 244 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 SLC24A3Q9HC58 644 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 CPNE5Q9HCH3 593 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 GALNT9Q9HCQ5 603 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 KLRF1Q9NZS2 232 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 PPP4R1LQ9P1A2 415 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 TCFL5Q9UL49 500 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 STUB1Q9UNE7 303 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 YARS2Q9Y2Z4 477 aaKnown RBP13.33□□□□□ -0.27
VPS33B-205ENST00000556096 WIF1Q9Y5W5 379 aa13.33□□□□□ -0.27
VPS33B-205ENST00000556096 C2orf72A6NCS6 295 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 C9orf172C9J069 976 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 TP53I11O14683 189 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 OR2T1O43869 369 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 ITGA10O75578 1167 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 GPX5O75715 221 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 SBK2P0C263 348 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 CLUP10909 449 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 TCN2P20062 427 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 SDHAP31040 664 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 TGFBR1P36897 503 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 CASP3P42574 277 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 CRYBB2P43320 205 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 MAP2K6P52564 334 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 CTXN1P60606 82 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 RPS7P62081 194 aaKnown RBP13.33□□□□□ -0.28
VPS33B-205ENST00000556096 RPL18Q07020 188 aaKnown RBP13.33□□□□□ -0.28
VPS33B-205ENST00000556096 LGALS3BPQ08380 585 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 SNTA1Q13424 505 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 IL10RAQ13651 578 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 GGTLC2Q14390 218 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 SSPNQ14714 243 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 GXYLT1Q4G148 440 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 SLC25A53Q5H9E4 307 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 SLC35D3Q5M8T2 416 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 C1orf140Q5VVS0 124 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 OR5M10Q6IEU7 315 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 POMZP3Q6PJE2 187 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 OPN5Q6U736 354 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 B3GLCTQ6Y288 498 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 TMPRSS11AQ6ZMR5 421 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 DND1Q8IYX4 353 aaKnown RBP13.33□□□□□ -0.28
VPS33B-205ENST00000556096 CT55Q8WUE5 264 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 CENPOQ9BU64 300 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 MED11Q9P086 117 aa13.33□□□□□ -0.28
VPS33B-205ENST00000556096 FARSAQ9Y285 508 aaKnown RBP13.33□□□□□ -0.28
VPS33B-205ENST00000556096 SPIN1Q9Y657 262 aaPredicted RBP13.33□□□□□ -0.28
VPS33B-205ENST00000556096 C12orf71A8MTZ7 269 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 B4DXG7 233 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 WISP1O95388 367 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 CELA2AP08217 269 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 ICAM2P13598 275 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 SLC16A1P53985 500 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 BDH1Q02338 343 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 GALEQ14376 348 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 TMEM164Q5U3C3 297 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 LCN1P1Q5VSP4 162 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 C1QL3Q5VWW1 255 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 LIPKQ5VXJ0 399 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 GPR139Q6DWJ6 353 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 ZNF322Q6U7Q0 402 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-205ENST00000556096 ADCK1Q86TW2 530 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 TMEM99Q8N816 258 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 UFD1Q92890 307 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 SLIRPQ9GZT3 109 aaKnown RBP13.32□□□□□ -0.28
VPS33B-205ENST00000556096 ADGRL4Q9HBW9 690 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 KLHL1Q9NR64 748 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 FBXL4Q9UKA2 621 aa13.32□□□□□ -0.28
VPS33B-205ENST00000556096 A3GALT2U3KPV4 340 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms