RNA–Protein interactions for RNA: ENST00000555690.5

PPP4R4-204, Transcript of protein phosphatase 4 regulatory subunit 4, human

TSL 3

Gene PPP4R4, Length 680 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R4-204	ENST00000555690	ZNF587B	E7ETH6	402 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	VAMP5	O95183	116 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	CSF3	P09919	207 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	ZCCHC18	P0CG32	403 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	TBRG1	Q3YBR2	411 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	CYB5R2	Q6BCY4	276 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	SERPINA11	Q86U17	422 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	PHC2	Q8IXK0	858 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	OR1K1	Q8NGR3	316 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	PROX1	Q92786	737 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	VPS33A	Q96AX1	596 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	TMEM19	Q96HH6	336 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	ALKBH3	Q96Q83	286 aa	Predicted RBP	21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	OBP2B	Q9NPH6	170 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	ZNF232	Q9UNY5	417 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	SVEP1	Q4LDE5	3571 aa		21.31	■■□□□ 1
PPP4R4-204	ENST00000555690	NPIPB7	O75200	414 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	FAM157C	P0CG43	387 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	USF1	P22415	310 aa	Predicted RBP	21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	PRAMEF8	Q5VWM4	474 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	PRAMEF7	Q5VXH5	474 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	NIPAL3	Q6P499	406 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	LINGO2	Q7L985	606 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	CROCCP2	Q86T23	111 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	EPHX4	Q8IUS5	362 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	C3orf49	Q96BT1	292 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	MAEL	Q96JY0	434 aa	Known RBP	21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	SLC38A2	Q96QD8	506 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	SPATA9	Q9BWV2	254 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	RMND5A	Q9H871	391 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690	RAB21	Q9UL25	225 aa		21.3	■■□□□ 1
PPP4R4-204	ENST00000555690		A0A096LPI6	279 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690		A0A0G2JPF8	293 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	HNRNPCL2	B2RXH8	293 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	HNRNPCL3	B7ZW38	293 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	SLCO1B7	G3V0H7	640 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	NR5A2	O00482	541 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	HNRNPCL1	O60812	293 aa	Known RBP	21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	HNRNPCL4	P0DMR1	293 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	IGHV4-31	P0DP07	118 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	HOXC5	Q00444	222 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	ZSWIM7	Q19AV6	140 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	OR9I1	Q8NGQ6	314 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	BCL2L2	Q92843	193 aa	Predicted RBP	21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	SLC25A36	Q96CQ1	311 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	ITCH	Q96J02	903 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	SORCS2	Q96PQ0	1159 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	KCNS3	Q9BQ31	491 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	BEX2	Q9BXY8	128 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	ARMC7	Q9H6L4	198 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	SDR39U1	Q9NRG7	319 aa	Predicted RBP	21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	ZIM2	Q9NZV7	527 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690	RASD1	Q9Y272	281 aa		21.29	■■□□□ 1
PPP4R4-204	ENST00000555690		A0A096LPE4	126 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690		A0A1W2PPZ6	126 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	TMEM247	A6NEH6	219 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	TMEM229A	B2RXF0	380 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	UPK3A	O75631	287 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	NUDT7	P0C024	238 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	ZNF16	P17020	682 aa	Predicted RBP	21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	POLR2J	P52435	117 aa	Known RBP	21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	UBE2N	P61088	152 aa	Known RBP	21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	TUBA1B	P68363	451 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	TUBA4A	P68366	448 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	LSM11	P83369	360 aa	Known RBP eCLIP	21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	ZNF311	Q5JNZ3	666 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	C6orf10	Q5SRN2	563 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	ATG16L1	Q676U5	607 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	TUBA1A	Q71U36	451 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	MAVS	Q7Z434	540 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	KDM8	Q8N371	416 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	STK35	Q8TDR2	534 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	TMEM158	Q8WZ71	300 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	OR52B2	Q96RD2	323 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	CACYBP	Q9HB71	228 aa	Known RBP	21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	CA10	Q9NS85	328 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	TMEM160	Q9NX00	188 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	THUMPD1	Q9NXG2	353 aa	Known RBP	21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	IFT52	Q9Y366	437 aa		21.28	■■□□□ 1
PPP4R4-204	ENST00000555690	OR6C65	A6NJZ3	312 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	FTCDNL1	E5RQL4	147 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	AHSA1	O95433	338 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	CRYAA	P02489	173 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	SERPINF1	P36955	418 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	RPS5	P46782	204 aa	Known RBP	21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	PDLIM4	P50479	330 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	SNRPD2	P62316	118 aa	Known RBP	21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	ANKRD16	Q6P6B7	361 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	MSANTD1	Q6ZTZ1	278 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	MFSD8	Q8NHS3	518 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	MAL2	Q969L2	176 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	KATNB1	Q9BVA0	655 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	FKBP7	Q9Y680	259 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	MALRD1	Q5VYJ5	2156 aa		21.27	■■□□□ 1
PPP4R4-204	ENST00000555690	UBD	O15205	165 aa		21.26	■□□□□ 0.99
PPP4R4-204	ENST00000555690	PHF1	O43189	567 aa	Predicted RBP	21.26	■□□□□ 0.99
PPP4R4-204	ENST00000555690	PNMT	P11086	282 aa		21.26	■□□□□ 0.99
PPP4R4-204	ENST00000555690	EGR4	Q05215	589 aa		21.26	■□□□□ 0.99
PPP4R4-204	ENST00000555690	GGTLC2	Q14390	218 aa		21.26	■□□□□ 0.99
PPP4R4-204	ENST00000555690	RGN	Q15493	299 aa		21.26	■□□□□ 0.99

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms