RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 RAI1Q7Z5J4 1906 aaPredicted RBP13.53□□□□□ -0.24
SNX6-205ENST00000555648 PRORSD1PA6NEY8 169 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 PDLIM1O00151 329 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 OR2T1O43869 369 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 BMP2P12643 396 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 ZNF43P17038 809 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 PAX7P23759 505 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 SLC6A2P23975 617 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 PRKAR1BP31321 381 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 MRPL19P49406 292 aaKnown RBP13.53□□□□□ -0.24
SNX6-205ENST00000555648 IRX1P78414 480 aaPredicted RBP13.53□□□□□ -0.24
SNX6-205ENST00000555648 HOXC5Q00444 222 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 CDK6Q00534 326 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 SPOCK1Q08629 439 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 AGKQ53H12 422 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 HMBOX1Q6NT76 420 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 REEP3Q6NUK4 255 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 BLOC1S3Q6QNY0 202 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 CLEC2AQ6UVW9 174 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 ZIC4Q8N9L1 334 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 MFSD8Q8NHS3 518 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 NFKBIDQ8NI38 313 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 ZNF607Q96SK3 696 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 AMBRA1Q9C0C7 1298 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 RABEP2Q9H5N1 569 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 OBP2BQ9NPH6 170 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 PMF1-BGLAPU3KQ54 211 aa13.53□□□□□ -0.24
SNX6-205ENST00000555648 NAV3Q8IVL0 2385 aa13.52□□□□□ -0.24
SNX6-205ENST00000555648 NDUFS7O75251 213 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 SERPINB7O75635 380 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 PNMTP11086 282 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 RPS5P46782 204 aaKnown RBP13.52□□□□□ -0.25
SNX6-205ENST00000555648 DSCR9P59020 149 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 SQLEQ14534 574 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 C5orf46Q6UWT4 87 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 CREB3L2Q70SY1 520 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 DNAJA4Q8WW22 397 aaPredicted RBP13.52□□□□□ -0.25
SNX6-205ENST00000555648 SLC38A4Q969I6 547 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 EBF4Q9BQW3 602 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.25
SNX6-205ENST00000555648 INTS9Q9NV88 658 aaKnown RBP13.52□□□□□ -0.25
SNX6-205ENST00000555648 NF1P21359 2839 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 TMEM229AB2RXF0 380 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 AIM2O14862 343 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 AKAP8O43823 692 aaKnown RBP13.51□□□□□ -0.25
SNX6-205ENST00000555648 LGI1O95970 557 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 ARAFP10398 606 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 APOBEC3AP31941 199 aaPredicted RBP13.51□□□□□ -0.25
SNX6-205ENST00000555648 SELENOPP49908 381 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 CLDN17P56750 224 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 SCARB2Q14108 478 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 ALG10BQ5I7T1 473 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 LSRQ86X29 649 aaPredicted RBP13.51□□□□□ -0.25
SNX6-205ENST00000555648 BHLHE22Q8NFJ8 381 aaPredicted RBP13.51□□□□□ -0.25
SNX6-205ENST00000555648 ALKBH3Q96Q83 286 aaPredicted RBP13.51□□□□□ -0.25
SNX6-205ENST00000555648 C12orf10Q9HB07 376 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 MOV10Q9HCE1 1003 aaKnown RBP13.51□□□□□ -0.25
SNX6-205ENST00000555648 SLC25A37Q9NYZ2 338 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 ANGPT4Q9Y264 503 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 CHST2Q9Y4C5 530 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 FREM1Q5H8C1 2179 aa13.51□□□□□ -0.25
SNX6-205ENST00000555648 NPIPB7O75200 414 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 SLC43A1O75387 559 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 NQO1P15559 274 aaKnown RBP13.5□□□□□ -0.25
SNX6-205ENST00000555648 ATP4BP51164 291 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 SH3BGRP55822 239 aaPredicted RBP13.5□□□□□ -0.25
SNX6-205ENST00000555648 RGS8P57771 180 aaPredicted RBP13.5□□□□□ -0.25
SNX6-205ENST00000555648 TBRG1Q3YBR2 411 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 FAM69AQ5T7M9 428 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 ULK3Q6PHR2 472 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 DHRS4L2Q6PKH6 230 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 B3GLCTQ6Y288 498 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 NET1Q7Z628 596 aaPredicted RBP13.5□□□□□ -0.25
SNX6-205ENST00000555648 FUNDC1Q8IVP5 155 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 KDM8Q8N371 416 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 GPR137CQ8N3F9 429 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 OR1K1Q8NGR3 316 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 KTI12Q96EK9 354 aaPredicted RBP13.5□□□□□ -0.25
SNX6-205ENST00000555648 SLC47A1Q96FL8 570 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 OXGR1Q96P68 337 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 ZNF317Q96PQ6 595 aaPredicted RBP13.5□□□□□ -0.25
SNX6-205ENST00000555648 EPYCQ99645 322 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 YAE1D1Q9NRH1 226 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 VAPAQ9P0L0 249 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 SLAMF8Q9P0V8 285 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 TRIM33Q9UPN9 1127 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 MOKQ9UQ07 419 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 MAP1AP78559 2803 aaPredicted RBP13.5□□□□□ -0.25
SNX6-205ENST00000555648 HIVEP2P31629 2446 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 ABCA2Q9BZC7 2435 aa13.5□□□□□ -0.25
SNX6-205ENST00000555648 PRR14LQ5THK1 2151 aa13.49□□□□□ -0.25
SNX6-205ENST00000555648 TRAV36DV7A0A075B6V5 113 aa13.49□□□□□ -0.25
SNX6-205ENST00000555648 A0A096LPE4 126 aa13.49□□□□□ -0.25
SNX6-205ENST00000555648 A0A1B0GWA3 101 aa13.49□□□□□ -0.25
SNX6-205ENST00000555648 A0A1W2PPZ6 126 aa13.49□□□□□ -0.25
SNX6-205ENST00000555648 ATP6V1G2-DDX39BF2Z307 99 aa13.49□□□□□ -0.25
SNX6-205ENST00000555648 ANGPT2O15123 496 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms