RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 OR2M3Q8NG83 312 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 OR6Q1Q8NGQ2 317 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 NDNFQ8TB73 568 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 GTPBP3Q969Y2 492 aaKnown RBP8.93□□□□□ -0.98
PSEN1-213ENST00000555386 ZHX1-C8orf76Q96EF9 292 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 USB1Q9BQ65 265 aaKnown RBP8.93□□□□□ -0.98
PSEN1-213ENST00000555386 KLHDC3Q9BQ90 382 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 PINK1Q9BXM7 581 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 CACYBPQ9HB71 228 aaKnown RBP8.93□□□□□ -0.98
PSEN1-213ENST00000555386 TAS2R10Q9NYW0 307 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 CALML5Q9NZT1 146 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 REV1Q9UBZ9 1251 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 MPDZO75970 2070 aa8.93□□□□□ -0.98
PSEN1-213ENST00000555386 TRGV8A0A0C4DH27 118 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 SERINC4A6NH21 518 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 M0R082 166 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 KPNA4O00629 521 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-213ENST00000555386 ADAM10O14672 748 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 AIREO43918 545 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 CBR3O75828 277 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 LGI1O95970 557 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 CSTAP01040 98 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 TPOP07202 933 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 UBL4AP11441 157 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 HK1P19367 917 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 GSTM3P21266 225 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 NR4A1P22736 598 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 C21orf33P30042 268 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-213ENST00000555386 LCN1P31025 176 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 LIPAP38571 399 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 SLC15A1P46059 708 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 CLK1P49759 484 aaKnown RBP8.92□□□□□ -0.98
PSEN1-213ENST00000555386 VBP1P61758 197 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF117Q03924 483 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 ST3GAL4Q11206 333 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 C3AR1Q16581 482 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 TIMM50Q3ZCQ8 353 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 ANKDD1AQ495B1 522 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 SLC25A30Q5SVS4 291 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 RAET1LQ5VY80 246 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 C12orf73Q69YU5 71 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 TMEM81Q6P7N7 255 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 CBLN3Q6UW01 205 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 ARSKQ6UWY0 536 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 DCDC5Q6ZRR9 648 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 PTCHD4Q6ZW05 846 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 IGFN1Q86VF2 1251 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 PEX5LQ8IYB4 626 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 GALNT11Q8NCW6 608 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 ST6GALNAC3Q8NDV1 305 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 KBTBD8Q8NFY9 601 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 OR52P1PQ8NH57 321 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 SMPDL3BQ92485 455 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 PRRC1Q96M27 445 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 MMP27Q9H306 513 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 PTGES2Q9H7Z7 377 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 ZDHHC11Q9H8X9 412 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 MTHFD2LQ9H903 347 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-213ENST00000555386 SLC25A19Q9HC21 320 aa8.92□□□□□ -0.98
PSEN1-213ENST00000555386 HELZ2Q9BYK8 2649 aaKnown RBP8.92□□□□□ -0.98
PSEN1-213ENST00000555386 A0A1W2PQD3 144 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 FAM47E-STBD1D6RA91 191 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 NPIPB9F8W1W9 429 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 J3QKU1 62 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF264O43296 627 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 OR10H3O60404 316 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 F12P00748 615 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 OPN1LWP04000 364 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 NGFRP08138 427 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 STSP08842 583 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ADORA3P0DMS8 318 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 POU2F1P14859 743 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 PTGS2P35354 604 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 GSSP48637 474 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF41P51814 821 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 NCS1P62166 190 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 SRYQ05066 204 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 RBPJQ06330 500 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF141Q15928 474 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 OCLNQ16625 522 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 HYAL4Q2M3T9 481 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 KRTCAP3Q53RY4 240 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF311Q5JNZ3 666 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 C1QL3Q5VWW1 255 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 PGBD2Q6P3X8 592 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 POMZP3Q6PJE2 187 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 CASP12Q6UXS9 341 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 DEF8Q6ZN54 512 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 TRILQ7L0X0 811 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 FGD2Q7Z6J4 655 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ZNF554Q86TJ5 538 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 ATP6V1C2Q8NEY4 427 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 OR8J1Q8NGP2 316 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 RNF138Q8WVD3 245 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 CNOT9Q92600 299 aaKnown RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 SFXN2Q96NB2 322 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 FNDC11Q9BVV2 318 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 SLIRPQ9GZT3 109 aaKnown RBP8.91□□□□□ -0.98
PSEN1-213ENST00000555386 SAP130Q9H0E3 1048 aa8.91□□□□□ -0.98
PSEN1-213ENST00000555386 POLR2J3Q9H1A7 115 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms