RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 UBE2E3Q969T4 207 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 MRGPRX3Q96LB0 322 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 LURAP1Q96LR2 239 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF607Q96SK3 696 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 TOLLIPQ9H0E2 274 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 EPHX3Q9H6B9 360 aa14.41□□□□□ -0.1
SYNE3-203ENST00000554873 CHMP1AQ9HD42 196 aaPredicted RBP14.41□□□□□ -0.1
SYNE3-203ENST00000554873 METTL21EPA6NDL7 271 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 NPIPB9F8W1W9 429 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 SYT5O00445 386 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 PQBP1O60828 265 aaKnown RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 MT-ND5P03915 603 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 NQO2P16083 231 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 CERS1P27544 350 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 SDHAP31040 664 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 RNF4P78317 190 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 MRPS10P82664 201 aaKnown RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 CNTN1Q12860 1018 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 ILF3Q12906 894 aaKnown RBP eCLIP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 FAM111BQ6SJ93 734 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 OR10H5Q8NGA6 315 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 SMPDL3AQ92484 453 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 VRK1Q99986 396 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 ACKR4Q9NPB9 350 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 AHSPQ9NZD4 102 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 IL36AQ9UHA7 158 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 SOCS6O14544 535 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 CXCL10P02778 98 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 MT-ND4LP03901 98 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 RLN1P04808 185 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 ANXA2P07355 339 aaKnown RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 ITGA3P26006 1051 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 TRHRP34981 398 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 BSGP35613 385 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 PCBP4P57723 403 aaKnown RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 TAS2R43P59537 309 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 RAB4BP61018 213 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 TSPAN31Q12999 210 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 PLEKHN1Q494U1 663 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 PRAMEF14Q5SWL7 426 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 REC114Q7Z4M0 266 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 HMGN2P46Q86SG4 172 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 OR4Q3Q8NH05 313 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 IRF7Q92985 503 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 RHOVQ96L33 236 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 NAA11Q9BSU3 229 aaPredicted RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 TRMT61BQ9BVS5 477 aaKnown RBP14.4□□□□□ -0.1
SYNE3-203ENST00000554873 ZDHHC5Q9C0B5 715 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 TDP1Q9NUW8 608 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 TNFSF18Q9UNG2 199 aa14.4□□□□□ -0.1
SYNE3-203ENST00000554873 DAPL1A0PJW8 107 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 AP4M1O00189 453 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 IFNGP01579 166 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 LRG1P02750 347 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 IFNGR2P38484 337 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 PMELP40967 661 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 CCR2P41597 374 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 RBP2P50120 134 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 GLT8D1Q68CQ7 371 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 SYT9Q86SS6 491 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 OR5J2Q8NH18 312 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 XAGE5Q8WWM1 108 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 TBX5Q99593 518 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 NDC1Q9BTX1 674 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 RAB5CP51148 216 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 ANKRD39Q53RE8 183 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 KHDRBS2Q5VWX1 349 aaKnown RBP14.39□□□□□ -0.11
SYNE3-203ENST00000554873 OR52W1Q6IF63 320 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 ZNF547Q8IVP9 402 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 GTPBP8Q8N3Z3 284 aaPredicted RBP14.39□□□□□ -0.11
SYNE3-203ENST00000554873 C17orf47Q8NEP4 570 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 OR4A4PQ8NGN8 299 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 MEGF10Q96KG7 1140 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 MFRPQ9BY79 579 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 ZDHHC4Q9NPG8 344 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 RCC2Q9P258 522 aaKnown RBP14.39□□□□□ -0.11
SYNE3-203ENST00000554873 MOKQ9UQ07 419 aa14.39□□□□□ -0.11
SYNE3-203ENST00000554873 ANKRD61A6NGH8 418 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 FADS1O60427 444 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 INHAP05111 366 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 CD79AP11912 226 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 RBM39Q14498 530 aaKnown RBP14.38□□□□□ -0.11
SYNE3-203ENST00000554873 FAM199XQ6PEV8 388 aaPredicted RBP14.38□□□□□ -0.11
SYNE3-203ENST00000554873 ABHD13Q7L211 337 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 ADCK2Q7Z695 626 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 PARGQ86W56 976 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 TMEM99Q8N816 258 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 PGLYRP3Q96LB9 341 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 NEU1Q99519 415 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 CHRDQ9H2X0 955 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 TMEM231Q9H6L2 316 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 NEUROD4Q9HD90 331 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 MMP26Q9NRE1 261 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 GOLGA4Q13439 2230 aaKnown RBP14.38□□□□□ -0.11
SYNE3-203ENST00000554873 ZNF705EA8MWA4 302 aaPredicted RBP14.38□□□□□ -0.11
SYNE3-203ENST00000554873 ACOT7O00154 380 aa14.38□□□□□ -0.11
SYNE3-203ENST00000554873 FARS2O95363 451 aaKnown RBP14.38□□□□□ -0.11
SYNE3-203ENST00000554873 FAUP35544 74 aaKnown RBP14.38□□□□□ -0.11
SYNE3-203ENST00000554873 PTH2RP49190 550 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms