RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 MMP21Q8N119 569 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 SYT14Q8NB59 555 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 NT5CQ8TCD5 201 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 UBASH3BQ8TF42 649 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 GATAD2BQ8WXI9 593 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 RFT1Q96AA3 541 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 ELP4Q96EB1 424 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 SLC41A3Q96GZ6 507 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 MED30Q96HR3 178 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 OR2M2Q96R28 347 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 CD180Q99467 661 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 C17orf62Q9BQA9 187 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 NDC1Q9BTX1 674 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 YIPF2Q9BWQ6 316 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 RANGRFQ9HD47 186 aaPredicted RBP10.18□□□□□ -0.78
SRP54-205ENST00000554803 PRDM7Q9NQW5 492 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 B3GNT2Q9NY97 397 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 ACTR10Q9NZ32 417 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 OR6C2Q9NZP2 312 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 ABRACLQ9P1F3 81 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 COMMD3Q9UBI1 195 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 NUFIP1Q9UHK0 495 aaKnown RBP10.18□□□□□ -0.78
SRP54-205ENST00000554803 NUBP2Q9Y5Y2 271 aa10.18□□□□□ -0.78
SRP54-205ENST00000554803 A0A087WV62 115 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 TRAV1-2A0A0B4J238 106 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 OR5K3A6NET4 321 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 UNC119BA6NIH7 251 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 OR6C70A6NIJ9 312 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 ARGFXA6NJG6 315 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 C21orf140B9A014 251 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 WWP2O00308 870 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 CTDSPLO15194 276 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 LRRTM2O43300 516 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 ERI3O43414 337 aaKnown RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 RNF13O43567 381 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 ZNF780AO75290 641 aaPredicted RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 GATBO75879 557 aaKnown RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 ARL6IP5O75915 188 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 EPPINO95925 133 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 IGFBP1P08833 259 aaPredicted RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 SAGP10523 405 aaPredicted RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 ARSBP15848 533 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 CELP19835 753 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 TLX1P31314 330 aaPredicted RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 RCVRNP35243 200 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 RBM34P42696 430 aaKnown RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 PITPNBP48739 271 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 FUT5Q11128 374 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 GALEQ14376 348 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 IL11RAQ14626 422 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 CD276Q5ZPR3 534 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 SLC22A10Q63ZE4 541 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 MFSD12Q6NUT3 480 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 NIPAL3Q6P499 406 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 PAQR6Q6TCH4 344 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 TMEM107Q6UX40 140 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 OAFQ86UD1 273 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 LRRC25Q8N386 305 aaPredicted RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 LNX2Q8N448 690 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 LRRC17Q8N6Y2 441 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 YIPF7Q8N8F6 280 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 OR2L3Q8NG85 312 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 OR8D4Q8NGM9 314 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 OIT3Q8WWZ8 545 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 RNF31Q96EP0 1072 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 ZNF681Q96N22 645 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 SECISBP2Q96T21 854 aaKnown RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 STACQ99469 402 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 MCHR1Q99705 422 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 ZNF649Q9BS31 505 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 PLA2G12AQ9BZM1 189 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 MMP28Q9H239 520 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 DPAGT1Q9H3H5 408 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 EGLN3Q9H6Z9 239 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 HRASLS2Q9NWW9 162 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 ZNF443Q9Y2A4 671 aaPredicted RBP10.17□□□□□ -0.78
SRP54-205ENST00000554803 ALG5Q9Y673 324 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 CCDC88CQ9P219 2028 aa10.17□□□□□ -0.78
SRP54-205ENST00000554803 SPTBP11277 2137 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 A0A1W2PR48 441 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 FEZF1A0PJY2 475 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 TUBAL3A6NHL2 446 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 C2orf74A8MZ97 194 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 ZNF749O43361 778 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 HPGDSO60760 199 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 PRAF2O60831 178 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 ZG16O60844 167 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 OR2B3O76000 313 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 AIFM1O95831 613 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 IFNGP01579 166 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 CLEC2LP0C7M8 214 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 PVRP15151 417 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 PRKCAP17252 672 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 RPS4Y1P22090 263 aaKnown RBP10.16□□□□□ -0.78
SRP54-205ENST00000554803 CAPZBP47756 277 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 GCGRP47871 477 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 GFERP55789 205 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 CTBP2P56545 445 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 ACTA2P62736 377 aa10.16□□□□□ -0.78
SRP54-205ENST00000554803 ACTG2P63267 376 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms