RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 HPGDP15428 266 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 PEX2P28328 305 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 ATP5J2P56134 94 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 CARD18P57730 90 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 TNK1Q13470 666 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 DCST2Q5T1A1 773 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 HEPHL1Q6MZM0 1159 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 TNFAIP8L2Q6P589 184 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-215ENST00000554656 LSRQ86X29 649 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-215ENST00000554656 ARMC8Q8IUR7 673 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 ZDHHC21Q8IVQ6 265 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 TUSC5Q8IXB3 177 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF619Q8N2I2 560 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 PHOSPHO1Q8TCT1 267 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 GPR119Q8TDV5 335 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 ADAMTS15Q8TE58 950 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 SLC38A5Q8WUX1 472 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 TMEM171Q8WVE6 324 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 DNAJC9Q8WXX5 260 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 AKAP1Q92667 903 aaKnown RBP eCLIP9.38□□□□□ -0.91
SHMT2-215ENST00000554656 MAL2Q969L2 176 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 TMEM19Q96HH6 336 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 HSH2DQ96JZ2 352 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 TRNT1Q96Q11 434 aaKnown RBP9.38□□□□□ -0.91
SHMT2-215ENST00000554656 OR7D2Q96RA2 312 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 KLHL13Q9P2N7 655 aa9.38□□□□□ -0.91
SHMT2-215ENST00000554656 GPC6Q9Y625 555 aaPredicted RBP9.38□□□□□ -0.91
SHMT2-215ENST00000554656 IGHV3-15A0A0B4J1V0 119 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 A0A1W2PNR3 127 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF814B7Z6K7 855 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 M0QX08 132 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 FABP3P05413 133 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 BCHEP06276 602 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 THBS1P07996 1170 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 NR2F1P10589 423 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ACADSP16219 412 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 PRKCAP17252 672 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ITGA2P17301 1181 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ENPP1P22413 925 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 EIF1P41567 113 aaKnown RBP9.37□□□□□ -0.91
SHMT2-215ENST00000554656 P2RX1P51575 399 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 CRYBA2P53672 197 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 SUMO3P55854 103 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-215ENST00000554656 TAB1Q15750 504 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 MAPK11Q15759 364 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 TMEM176BQ3YBM2 270 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-215ENST00000554656 IFI44LQ53G44 452 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 NCMAPQ5T1S8 102 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 SFRP5Q5T4F7 317 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ALKBH2Q6NS38 261 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ADAM5Q6NVV9 412 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 IZUMO2Q6UXV1 221 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 FCRLAQ7L513 359 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 OLIG3Q7RTU3 272 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 STK32CQ86UX6 486 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 SVOPLQ8N434 492 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 FAM86B1Q8N7N1 296 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 MAPK1IP1LQ8NDC0 245 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ICA1LQ8NDH6 482 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 STEAP2Q8NFT2 490 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 XAGE5Q8WWM1 108 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 GEMIN6Q8WXD5 167 aaKnown RBP9.37□□□□□ -0.91
SHMT2-215ENST00000554656 CPNE4Q96A23 557 aaPredicted RBP9.37□□□□□ -0.91
SHMT2-215ENST00000554656 EME1Q96AY2 570 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 TAMM41Q96BW9 452 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 NRBF2Q96F24 287 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 TACO1Q9BSH4 297 aaKnown RBP9.37□□□□□ -0.91
SHMT2-215ENST00000554656 CXorf56Q9H5V9 222 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 HHATLQ9HCP6 504 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 POLE3Q9NRF9 147 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 KCNE5Q9UJ90 142 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 LAMP3Q9UQV4 416 aa9.37□□□□□ -0.91
SHMT2-215ENST00000554656 ANK3Q12955 4377 aaKnown RBP9.37□□□□□ -0.91
SHMT2-215ENST00000554656 DSPPQ9NZW4 1301 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ALPK2Q86TB3 2170 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 YLPM1P49750 1951 aaKnown RBP9.36□□□□□ -0.91
SHMT2-215ENST00000554656 MXRA5Q9NR99 2828 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 PRAMEF27A3QJZ7 478 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ETV2O00321 342 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-215ENST00000554656 TPST1O60507 370 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 MFN2O95140 757 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 H6PDO95479 791 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 NUDT14O95848 222 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 CST1P01037 141 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 DANCRP0C864 163 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ZNF26P17031 533 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ATP6V1C1P21283 382 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ATP12AP54707 1039 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 RPS26P62854 115 aaKnown RBP9.36□□□□□ -0.91
SHMT2-215ENST00000554656 KCNJ10P78508 379 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 HPCAP84074 193 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 FUT5Q11128 374 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 RNPS1Q15287 305 aaKnown RBP9.36□□□□□ -0.91
SHMT2-215ENST00000554656 SYPL1Q16563 259 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ARHGAP11BQ3KRB8 267 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 SLC25A53Q5H9E4 307 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 PDSS1Q5T2R2 415 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 LPCAT4Q643R3 524 aa9.36□□□□□ -0.91
SHMT2-215ENST00000554656 ZBTB49Q6ZSB9 765 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms