RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 FAPQ12884 760 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 BNIP2Q12982 314 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 SCARB2Q14108 478 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 ELOA3BQ3SY89 546 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 C1orf140Q5VVS0 124 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 NANOGP8Q6NSW7 305 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 SEZ6L2Q6UXD5 910 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 CASP12Q6UXS9 341 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 ABHD12BQ7Z5M8 362 aaPredicted RBP7.69□□□□□ -1.18
ACTN1-213ENST00000554508 BIVMQ86UB2 503 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 KRTAP1-3Q8IUG1 177 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 POMGNT2Q8NAT1 580 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 HIPK4Q8NE63 616 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 ELOA3Q8NG57 546 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 OR9K2Q8NGE7 335 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 LILRB1Q8NHL6 650 aaPredicted RBP7.69□□□□□ -1.18
ACTN1-213ENST00000554508 MFSD8Q8NHS3 518 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 DNAJA4Q8WW22 397 aaPredicted RBP7.69□□□□□ -1.18
ACTN1-213ENST00000554508 FBXW5Q969U6 566 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 LRRC58Q96CX6 371 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 C18orf12Q96KH6 178 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 ANKRD27Q96NW4 1050 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 CGREF1Q99674 301 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 CPPED1Q9BRF8 314 aaPredicted RBP7.69□□□□□ -1.18
ACTN1-213ENST00000554508 TRIM2Q9C040 744 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 NANOGQ9H9S0 305 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 ARL8BQ9NVJ2 186 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 TAGLN3Q9UI15 199 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 MGAT4BQ9UQ53 548 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 RASD1Q9Y272 281 aa7.69□□□□□ -1.18
ACTN1-213ENST00000554508 DPRXA6NFQ7 191 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 OR6C65A6NJZ3 312 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 PDLIM1O00151 329 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 CLOCKO15516 846 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 FRS3O43559 492 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 RAD51DO75771 328 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 PNMTP11086 282 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 PAX7P23759 505 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 MPGP29372 298 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 PTH2RP49190 550 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 MXRA7P84157 204 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 EGR4Q05215 589 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SELPLGQ14242 412 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 ADRM1Q16186 407 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 GABRA6Q16445 453 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 CYP51A1Q16850 503 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 ZNF672Q499Z4 452 aaPredicted RBP7.68□□□□□ -1.18
ACTN1-213ENST00000554508 Q5PR19 223 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 FAM91A1Q658Y4 838 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 ULK3Q6PHR2 472 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 KLHL17Q6TDP4 642 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 C6orf89Q6UWU4 347 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 AAED1Q7RTV5 226 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 NET1Q7Z628 596 aaPredicted RBP7.68□□□□□ -1.18
ACTN1-213ENST00000554508 YTHDF3Q7Z739 585 aaKnown RBP7.68□□□□□ -1.18
ACTN1-213ENST00000554508 ARMC8Q8IUR7 673 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SLC30A8Q8IWU4 369 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 C10orf111Q8N326 155 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 C17orf78Q8N4C9 275 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 C11orf65Q8NCR3 313 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 C1orf162Q8NEQ5 155 aaPredicted RBP7.68□□□□□ -1.18
ACTN1-213ENST00000554508 OR52E4Q8NGH9 312 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SLC47A1Q96FL8 570 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 PERPQ96FX8 193 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 BOD1Q96IK1 185 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SH3GL1Q99961 368 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 BDH2Q9BUT1 245 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 AMBRA1Q9C0C7 1298 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 IKZF5Q9H5V7 419 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 TMEM27Q9HBJ8 222 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SLC7A10Q9NS82 523 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 ZNF701Q9NV72 531 aaPredicted RBP7.68□□□□□ -1.18
ACTN1-213ENST00000554508 ADPRHL2Q9NX46 363 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SELENONQ9NZV5 590 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 TESQ9UGI8 421 aaKnown RBP7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SLC13A4Q9UKG4 626 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 LAMP3Q9UQV4 416 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 ANGPT4Q9Y264 503 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 SLC25A15Q9Y619 301 aa7.68□□□□□ -1.18
ACTN1-213ENST00000554508 NAV3Q8IVL0 2385 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 A0A1B0GWA3 101 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 FAM171A2A8MVW0 826 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 FTCDNL1E5RQL4 147 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 FXYD1O00168 92 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 TPST1O60507 370 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 FZD7O75084 574 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 MFN2O95140 757 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 C8BP07358 591 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 ITGA5P08648 1049 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 INHBBP09529 407 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 DANCRP0C864 163 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 PTAFRP25105 342 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 GTF2E2P29084 291 aaKnown RBP7.67□□□□□ -1.18
ACTN1-213ENST00000554508 RPS5P46782 204 aaKnown RBP7.67□□□□□ -1.18
ACTN1-213ENST00000554508 P2RY4P51582 365 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 MNAT1P51948 309 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 PCBP3P57721 371 aaKnown RBP7.67□□□□□ -1.18
ACTN1-213ENST00000554508 RGS8P57771 180 aaPredicted RBP7.67□□□□□ -1.18
ACTN1-213ENST00000554508 NCALDP61601 193 aa7.67□□□□□ -1.18
ACTN1-213ENST00000554508 RPS4XP62701 263 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms