RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 TMCO6Q96DC7 493 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ARSGQ96EG1 525 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 PYURFQ96I23 114 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 TPD52L3Q96J77 140 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 C7orf34Q96L11 122 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SECISBP2Q96T21 854 aaKnown RBP5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ARHGDIGQ99819 225 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 AIFM2Q9BRQ8 373 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 UTP23Q9BRU9 249 aaKnown RBP5.7□□□□□ -1.5
SCFD1-212ENST00000554486 DOHHQ9BU89 302 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ANGPTL4Q9BY76 406 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 HES7Q9BYE0 225 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 TBL1XR1Q9BZK7 514 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 PRORYQ9H606 182 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 METTL7AQ9H8H3 244 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 DEPPQ9NTK1 212 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 TBC1D23Q9NUY8 699 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ADPRHL2Q9NX46 363 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 CNIH4Q9P003 139 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 LRFN1Q9P244 771 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 RPS6KA6Q9UK32 745 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ABCG2Q9UNQ0 655 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SAMD4AQ9UPU9 718 aaKnown RBP5.7□□□□□ -1.5
SCFD1-212ENST00000554486 CSAG2Q9Y5P2 127 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ATRXP46100 2492 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 DNAJC13O75165 2243 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF407Q9C0G0 2248 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 IGLV3-32A0A0A0MS00 114 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 DHRS12A0PJE2 317 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 PINLYPA6NC86 204 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 ZAR1LA6NP61 321 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 G3V3Y1 287 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 H3BNH8 94 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 MKRN2OSH3BPM6 223 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 EIF4E2O60573 245 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 TPST2O60704 377 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 ENTPD5O75356 428 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 TRIM3O75382 744 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SLC25A12O75746 678 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 STAMBPO95630 424 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 ANGPTL1O95841 491 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 CSTAP01040 98 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 UBTFL6P0CB48 400 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 GKN3PP0CG01 181 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 UBL4AP11441 157 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 PRG2P13727 222 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 HPGDP15428 266 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 CNR1P21554 472 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 ACAA2P42765 397 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 OR1E2P47887 323 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 PTDSS1P48651 473 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 TNFSF10P50591 281 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 RPP38P78345 283 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 ELF3P78545 371 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 VLDLRP98155 873 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 HOXC5Q00444 222 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 FOXO1Q12778 655 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SKP2Q13309 424 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SNTA1Q13424 505 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 INPP5JQ15735 1006 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 IFI44LQ53G44 452 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 EIPR1Q53HC9 387 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SFRP4Q6FHJ7 346 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 OR5M10Q6IEU7 315 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SLC30A6Q6NXT4 461 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 CBLN3Q6UW01 205 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 IGFL3Q6UXB1 125 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 DTX2Q86UW9 622 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 CARM1Q86X55 608 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 RBM45Q8IUH3 476 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 RBMXL3Q8N7X1 1067 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 PAPD5Q8NDF8 572 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 OR6T1Q8NGN1 323 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 DUSP19Q8WTR2 217 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM171Q8WVE6 324 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 RASSF5Q8WWW0 418 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 GEMIN6Q8WXD5 167 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 LZICQ8WZA0 190 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 PROX1Q92786 737 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 RFKQ969G6 155 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SLC47A1Q96FL8 570 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 DUS3LQ96G46 650 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SCMH1Q96GD3 660 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 RSRC1Q96IZ7 334 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SEPHS2Q99611 448 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 OSBPL11Q9BXB4 747 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 LAT2Q9GZY6 243 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 MAGIXQ9H6Y5 334 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 CACYBPQ9HB71 228 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 KLHL1Q9NR64 748 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 KLRF1Q9NZS2 232 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 TESQ9UGI8 421 aaKnown RBP5.69□□□□□ -1.5
SCFD1-212ENST00000554486 ANAPC2Q9UJX6 822 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 BAG5Q9UL15 447 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 ICAM5Q9UMF0 924 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SLC35A3Q9Y2D2 325 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 CARD8Q9Y2G2 431 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 NTNG1Q9Y2I2 539 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 SH3GLB1Q9Y371 365 aa5.69□□□□□ -1.5
SCFD1-212ENST00000554486 RRP15Q9Y3B9 282 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms