RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 Q9UF83 564 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 ANAPC7Q9UJX3 599 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 STARD10Q9Y365 291 aa3.73□□□□□ -1.81
SCFD1-211ENST00000554437 RPAP1Q9BWH6 1393 aaPredicted RBP3.73□□□□□ -1.81
SCFD1-211ENST00000554437 A0A1W2PPE3 182 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 EIF3HO15372 352 aaKnown RBP eCLIP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 GPAA1O43292 621 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 OR2J3O76001 311 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 SERPIND1P05546 499 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 WNT2P09544 360 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 GIG44P09565 113 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 H2BFMP0C1H6 154 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ZNF24P17028 368 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 CCNOP22674 350 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 MMP11P24347 488 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 GDF1P27539 372 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 CD1CP29017 333 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 GTF2E2P29084 291 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 HMOX2P30519 316 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 LCN1P31025 176 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 YWHABP31946 246 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 RPL13AP40429 203 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 MDH2P40926 338 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 P2RY1P47900 373 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 UQCRFS1P47985 274 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ARHGDIBP52566 201 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 PLTPP55058 493 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 TNNC1P63316 161 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 NTHL1P78549 312 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 CXCL6P80162 114 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 IGLV3-21P80748 117 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 IL9RQ01113 521 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ZNF85Q03923 595 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ZNF33BQ06732 778 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 RCAN2Q14206 197 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 RSBN1Q5VWQ0 802 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 WSCD1Q658N2 575 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 SCYL2Q6P3W7 929 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ERICH1Q86X53 443 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ST13P4Q8IZP2 240 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 C11orf42Q8N5U0 333 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 FNDC5Q8NAU1 212 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 OR4F17Q8NGA8 305 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ANGPTL6Q8NI99 470 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 RFESDQ8TAC1 157 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ASB9Q96DX5 294 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 C12orf42Q96LP6 360 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 OR4F4Q96R69 305 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ACBD6Q9BR61 282 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 TMEM175Q9BSA9 504 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 BBS2Q9BXC9 721 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 DEFB126Q9BYW3 111 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 FRMD8P1Q9BZ68 369 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 COMMD4Q9H0A8 199 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 NXF5Q9H1B4 397 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 RHBGQ9H310 441 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 AZI2Q9H6S1 392 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 ZNF275Q9NSD4 429 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 NRBP2Q9NSY0 501 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 LYARQ9NX58 379 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 DUS2Q9NX74 493 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 MRPL39Q9NYK5 338 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 IL36GQ9NZH8 169 aa3.72□□□□□ -1.81
SCFD1-211ENST00000554437 STOX2Q9P2F5 926 aaPredicted RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 PURGQ9UJV8 347 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 EIF3LQ9Y262 564 aaKnown RBP3.72□□□□□ -1.81
SCFD1-211ENST00000554437 LRIT2A6NDA9 550 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 PDZK1P1A8MUH7 402 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 SERPINE3A8MV23 424 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 A8MX80 341 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 RSPH10B2B2RC85 870 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 C11orf98E9PRG8 122 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 CLOCKO15516 846 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 KDELR3O43731 214 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 TOXO94900 526 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 DIRAS1O95057 198 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 GJB5O95377 273 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 RSPH10BP0C881 870 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 SLC35E2P0CK97 266 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 LAMP1P11279 417 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 H2AFXP16104 143 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 EIF2S2P20042 333 aaKnown RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 IMPDH1P20839 514 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 IDSP22304 550 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 HMGB2P26583 209 aaKnown RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 STOMP27105 288 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 DUSP3P51452 185 aaPredicted RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 ITIH4Q14624 930 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 MRPL23Q16540 153 aaKnown RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 BEND3Q5T5X7 828 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 GPR157Q5UAW9 335 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 PNCKQ6P2M8 343 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 CCDC137Q6PK04 289 aaKnown RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 TRMT10CQ7L0Y3 403 aaKnown RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 TSEN54Q7Z6J9 526 aaKnown RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 TRIM69Q86WT6 500 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 ERI1Q8IV48 349 aaKnown RBP3.71□□□□□ -1.82
SCFD1-211ENST00000554437 MFSD6LQ8IWD5 586 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 TMEM104Q8NE00 496 aa3.71□□□□□ -1.82
SCFD1-211ENST00000554437 OR10A7Q8NGE5 316 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms