RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 VRK2Q86Y07 508 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 ZIC4Q8N9L1 334 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 OR52P1PQ8NH57 321 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 APH1AQ96BI3 265 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 FOXN4Q96NZ1 517 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 RAD21L1Q9H4I0 556 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 SLC17A5Q9NRA2 495 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 ASB6Q9NWX5 421 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 SLAMF8Q9P0V8 285 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 POU2F3Q9UKI9 436 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF232Q9UNY5 417 aa10.08□□□□□ -0.8
TUBB3-204ENST00000554116 SPIN1Q9Y657 262 aaPredicted RBP10.08□□□□□ -0.8
TUBB3-204ENST00000554116 A0A0G2JPF8 293 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 LOC100289279A0A1B0GTE1 492 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 HNRNPCL2B2RXH8 293 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 HNRNPCL3B7ZW38 293 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 HNRNPCL1O60812 293 aaKnown RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 EDF1O60869 148 aaKnown RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 IGFBP1P08833 259 aaPredicted RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 HNRNPCL4P0DMR1 293 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 CCNA2P20248 432 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 FKBP2P26885 142 aaKnown RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 APOBEC3AP31941 199 aaPredicted RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 CSNK2A1P68400 391 aaPredicted RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 GGTLC2Q14390 218 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 SQLEQ14534 574 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 LIN52Q52LA3 116 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 RPS26P11Q5JNZ5 115 aaPredicted RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 FAM166AQ6J272 317 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 KLHL17Q6TDP4 642 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 UBE2J2Q8N2K1 259 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 SLC25A43Q8WUT9 341 aaPredicted RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 FBXO17Q96EF6 278 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM19Q96HH6 336 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 PLA2G12AQ9BZM1 189 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 RABEP2Q9H5N1 569 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 CACYBPQ9HB71 228 aaKnown RBP10.07□□□□□ -0.8
TUBB3-204ENST00000554116 NPHS2Q9NP85 383 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 SLC52A3Q9NQ40 469 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 RLIMQ9NVW2 624 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 TMEM45AQ9NWC5 275 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 CHRNA9Q9UGM1 479 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 DCTN4Q9UJW0 460 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 KCNS2Q9ULS6 477 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 MOKQ9UQ07 419 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 FLVCR1Q9Y5Y0 555 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 ATP23Q9Y6H3 246 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 DSPPQ9NZW4 1301 aa10.07□□□□□ -0.8
TUBB3-204ENST00000554116 TMED7-TICAM2A0A0A6YYA0 188 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 IGHV1-18A0A0C4DH31 117 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 CDHR4A6H8M9 788 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 CFAP73A6NFT4 308 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 MRPL33O75394 65 aaKnown RBP10.06□□□□□ -0.8
TUBB3-204ENST00000554116 CSF3P09919 207 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 NUDT7P0C024 238 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 GKN3PP0CG01 181 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 UQCRBP14927 111 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 HOXB9P17482 250 aaPredicted RBP10.06□□□□□ -0.8
TUBB3-204ENST00000554116 IL2RGP31785 369 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 SLC1A3P43003 542 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 HTR3AP46098 478 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 CLK1P49759 484 aaKnown RBP10.06□□□□□ -0.8
TUBB3-204ENST00000554116 POLR2HP52434 150 aaKnown RBP10.06□□□□□ -0.8
TUBB3-204ENST00000554116 EPS8Q12929 822 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 FADDQ13158 208 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 SLC17A1Q14916 467 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 LARS2Q15031 903 aaKnown RBP10.06□□□□□ -0.8
TUBB3-204ENST00000554116 ZSWIM7Q19AV6 140 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 LRIF1Q5T3J3 769 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 OR7E24Q6IFN5 339 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 MEX3DQ86XN8 651 aaKnown RBP10.06□□□□□ -0.8
TUBB3-204ENST00000554116 MSRB3Q8IXL7 192 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF440Q8IYI8 595 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 ANKS4BQ8N8V4 417 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 STON2Q8WXE9 905 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 MAL2Q969L2 176 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 BOD1Q96IK1 185 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 ARMC7Q9H6L4 198 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 A4GALTQ9NPC4 353 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF446Q9NWS9 450 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 SLC25A37Q9NYZ2 338 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 EMC3Q9P0I2 261 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 TRIM33Q9UPN9 1127 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF443Q9Y2A4 671 aaPredicted RBP10.06□□□□□ -0.8
TUBB3-204ENST00000554116 IFT52Q9Y366 437 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 TMED7Q9Y3B3 224 aa10.06□□□□□ -0.8
TUBB3-204ENST00000554116 A0A0G2JND7 137 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 ZC3H12DA2A288 527 aaKnown RBP10.05□□□□□ -0.8
TUBB3-204ENST00000554116 C5orf58C9J3I9 102 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 FAAHO00519 579 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 BMP2P12643 396 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 PPIBP23284 216 aaKnown RBP10.05□□□□□ -0.8
TUBB3-204ENST00000554116 TACR3P29371 465 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 PDLIM4P50479 330 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 LGALS3BPQ08380 585 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 CR1LQ2VPA4 569 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 HIKESHIQ53FT3 197 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF311Q5JNZ3 666 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 ZNF836Q6ZNA1 936 aa10.05□□□□□ -0.8
TUBB3-204ENST00000554116 LINGO2Q7L985 606 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms