RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 B3GALT5Q9Y2C3 310 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 IFT52Q9Y366 437 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 GMEB1Q9Y692 573 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 MXRA5Q9NR99 2828 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 A0A096LNT2 108 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 TMEM247A6NEH6 219 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ELOA3DA6NLF2 546 aaPredicted RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 TMEM229AB2RXF0 380 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 M0R1B8 84 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 FRS3O43559 492 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 CD5LO43866 347 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 SNX3O60493 162 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 SHOX2O60902 331 aaPredicted RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ANP32DO95626 131 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 WNT11O96014 354 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 NPPAP01160 153 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 TP53P04637 393 aaPredicted RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 BCHEP06276 602 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 CSF3P09919 207 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 BMP4P12644 408 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ETFAP13804 333 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ETS2P15036 469 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 HOXB9P17482 250 aaPredicted RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 CCNA2P20248 432 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 DRD4P21917 467 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 CRATP43155 626 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF83P51522 516 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 P2RY4P51582 365 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 POLR2JP52435 117 aaKnown RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 FOXG1P55316 489 aaPredicted RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 PRPS1P60891 318 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 CEACAM7Q14002 265 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 C3orf36Q3SXR2 165 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ELOA3BQ3SY89 546 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 COQ5Q5HYK3 327 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 TSPO2Q5TGU0 170 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 C1orf140Q5VVS0 124 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 C5orf46Q6UWT4 87 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 C6orf89Q6UWU4 347 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 B3GLCTQ6Y288 498 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 AAED1Q7RTV5 226 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 SPATA21Q7Z572 469 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 VRK2Q86Y07 508 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 FBXL14Q8N1E6 418 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 MUC15Q8N387 334 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 TMEM99Q8N816 258 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 FAM169BQ8N8A8 192 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ANKS4BQ8N8V4 417 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ZIC4Q8N9L1 334 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ANKK1Q8NFD2 765 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ELOA3Q8NG57 546 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 OR10H5Q8NGA6 315 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 MFSD8Q8NHS3 518 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 PNPT1Q8TCS8 783 aaKnown RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 MAGEE2Q8TD90 523 aaPredicted RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 STK35Q8TDR2 534 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 C10orf82Q8WW14 230 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 C3orf49Q96BT1 292 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 OR52B2Q96RD2 323 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 EBF4Q9BQW3 602 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 RHNO1Q9BSD3 238 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 TMEM120AQ9BXJ8 343 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 LINC00470Q9BZP3 86 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 CACYBPQ9HB71 228 aaKnown RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 A4GALTQ9NPC4 353 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 RLIMQ9NVW2 624 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 GDF2Q9UK05 429 aaPredicted RBP5.79□□□□□ -1.48
SLIRP-203ENST00000554074 ADAM21Q9UKJ8 722 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 RASD1Q9Y272 281 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 CHST2Q9Y4C5 530 aa5.79□□□□□ -1.48
SLIRP-203ENST00000554074 FBN1P35555 2871 aaKnown RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 ARPC4-TTLL3A0A0A6YYG9 625 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 LOC102725191A0A1B0GVB3 256 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 BBIP1A8MTZ0 92 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 KIAA1324LA8MWY0 1029 aaPredicted RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 FTCDNL1E5RQL4 147 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 RPL36A-HNRNPH2H7BZ11 118 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CLIC1O00299 241 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 SSX4O60224 188 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 NDUFS7O75251 213 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 AKR7A3O95154 331 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 AHSA1O95433 338 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 FAM107AO95990 144 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 GKN3PP0CG01 181 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 SLC25A16P16260 332 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 NCF2P19878 526 aaPredicted RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 PPIBP23284 216 aaKnown RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 PRKAR1BP31321 381 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 APOBEC3AP31941 199 aaPredicted RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 FABP6P51161 128 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 NUDT6P53370 316 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 SH3BGRP55822 239 aaPredicted RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 SLC25A3Q00325 362 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 CHRNB3Q05901 458 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 LOXL1Q08397 574 aaPredicted RBP5.78□□□□□ -1.48
SLIRP-203ENST00000554074 SPOCK1Q08629 439 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 RGNQ15493 299 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 OR7A5Q15622 319 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 GTDC1Q4AE62 458 aa5.78□□□□□ -1.48
SLIRP-203ENST00000554074 C6orf10Q5SRN2 563 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms