RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CDC42EP2O14613 210 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 IMPDH2P12268 514 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 ENPP1P22413 925 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 UQCRC1P31930 480 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 PTGER4P35408 488 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 EIF1AXP47813 144 aaKnown RBP13.02□□□□□ -0.33
SHMT2-210ENST00000553950 SMSP52788 366 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 AQP4P55087 323 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 CARD18P57730 90 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 FOXK1P85037 733 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 RBPJQ06330 500 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 PUDPQ08623 228 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 NPRL3Q12980 569 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 IL18R1Q13478 541 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 CTU2Q2VPK5 515 aaKnown RBP13.02□□□□□ -0.33
SHMT2-210ENST00000553950 SLC36A3Q495N2 470 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 ZNF324BQ6AW86 544 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-210ENST00000553950 SLC27A4Q6P1M0 643 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 H1FNTQ75WM6 255 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-210ENST00000553950 GALNT5Q7Z7M9 940 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 DHRSXQ8N5I4 330 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 OR2T33Q8NG76 320 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 OR10D3Q8NH80 312 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 ZNF417Q8TAU3 575 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 SLC39A7Q92504 469 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 GPX7Q96SL4 187 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-210ENST00000553950 ZNF587Q96SQ5 575 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-210ENST00000553950 SLX1AQ9BQ83 275 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 TSPAN10Q9H1Z9 355 aaPredicted RBP13.02□□□□□ -0.33
SHMT2-210ENST00000553950 OR52D1Q9H346 318 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 TOR3AQ9H497 397 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 SLC25A19Q9HC21 320 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 FANCFQ9NPI8 374 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 SPRR3Q9UBC9 169 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 ZNF175Q9Y473 711 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 MED12Q93074 2177 aa13.02□□□□□ -0.33
SHMT2-210ENST00000553950 LAMA5O15230 3695 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 TLN1Q9Y490 2541 aaKnown RBP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 TRAV27A0A087WT01 109 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 A0A0J9YW62 118 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 A0A1W2PNR3 127 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 AQP7P3A6NL99 342 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 FIGNL2A6NMB9 653 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 AKAP8O43823 692 aaKnown RBP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 WISP1O95388 367 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 SOX14O95416 240 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 TSPAN19P0C672 248 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 APEHP13798 732 aaKnown RBP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 GABRA1P14867 456 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 SHC1P29353 583 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 RPL4P36578 427 aaKnown RBP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 DAP3P51398 398 aaKnown RBP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 CRISP1P54107 249 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 CLDN20P56880 219 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 ZP4Q12836 540 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 KEAP1Q14145 624 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 ALG10Q5BKT4 473 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 FAM205BPQ63HN1 556 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 SETD9Q8NE22 299 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 ANKK1Q8NFD2 765 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 TIMP4Q99727 224 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 APOL4Q9BPW4 351 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 TACO1Q9BSH4 297 aaKnown RBP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 ADI1Q9BV57 179 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 SF3B5Q9BWJ5 86 aaKnown RBP13.01□□□□□ -0.33
SHMT2-210ENST00000553950 REV1Q9UBZ9 1251 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 RAB26Q9ULW5 256 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 CAMK2AQ9UQM7 478 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 NOX1Q9Y5S8 564 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 SPTA1P02549 2419 aa13.01□□□□□ -0.33
SHMT2-210ENST00000553950 SVILO95425 2214 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 A0A1W2PRG6 482 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 BLOC1S5-TXNDC5H3BN57 136 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 M0R3G1 203 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 PLPP3O14495 311 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 ATXN7O15265 892 aaPredicted RBP13□□□□□ -0.33
SHMT2-210ENST00000553950 IDH3BO43837 385 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 WDR1O75083 606 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 SNAP29O95721 258 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 EDN3P14138 238 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 PTGS2P35354 604 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 CAPGP40121 348 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 AGFG1P52594 562 aaKnown RBP13□□□□□ -0.33
SHMT2-210ENST00000553950 TPD52P55327 224 aaPredicted RBP13□□□□□ -0.33
SHMT2-210ENST00000553950 CLDN15P56746 228 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 CDC42P60953 191 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 RPL18Q07020 188 aaKnown RBP13□□□□□ -0.33
SHMT2-210ENST00000553950 POU4F3Q15319 338 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 EMC4Q5J8M3 183 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 C1QL3Q5VWW1 255 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 GPR139Q6DWJ6 353 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 GTF2IRD2BQ6EKJ0 949 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 ABLIM2Q6H8Q1 611 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 DPY19L2P2Q6ZN68 376 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 GTF2IRD2Q86UP8 949 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 DEPDC4Q8N2C3 294 aa13□□□□□ -0.33
SHMT2-210ENST00000553950 CISD2Q8N5K1 135 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms