RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 EDARQ9UNE0 448 aa12.55□□□□□ -0.4
PRKCH-207ENST00000553831 HIVEP1P15822 2718 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 A0A087WUJ7 227 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 CPSF4LA6NMK7 179 aaKnown RBP12.54□□□□□ -0.4
PRKCH-207ENST00000553831 FAM220BPB1ANY3 271 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 RAD51DO75771 328 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 VAMP5O95183 116 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 ITGA5P08648 1049 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 GGT1P19440 569 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 DRD4P21917 467 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 NR1H2P55055 460 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 CDH12P55289 794 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 FOXG1P55316 489 aaPredicted RBP12.54□□□□□ -0.4
PRKCH-207ENST00000553831 FAPQ12884 760 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 VEZF1Q14119 521 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
PRKCH-207ENST00000553831 TSPO2Q5TGU0 170 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 TMEM225Q6GV28 225 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 ERICH5Q6P6B1 374 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 SEZ6L2Q6UXD5 910 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 HSD17B8Q92506 261 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 MBD6Q96DN6 1003 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 FOXC2Q99958 501 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 USB1Q9BQ65 265 aaKnown RBP12.54□□□□□ -0.4
PRKCH-207ENST00000553831 NSRP1Q9H0G5 558 aaKnown RBP12.54□□□□□ -0.4
PRKCH-207ENST00000553831 UBTD1Q9HAC8 227 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 SLC7A10Q9NS82 523 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 PARPBPQ9NWS1 579 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 TAS2R16Q9NYV7 291 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 RASD1Q9Y272 281 aa12.54□□□□□ -0.4
PRKCH-207ENST00000553831 PRRC2AP48634 2157 aaKnown RBP12.53□□□□□ -0.4
PRKCH-207ENST00000553831 M0R082 166 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 PDLIM1O00151 329 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 AIM2O14862 343 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 CHP2O43745 196 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 OR2T1O43869 369 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 SNX3O60493 162 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 PLAUP00749 431 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 CD53P19397 219 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 CBLP22681 906 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 GRPRP30550 384 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 ENTPD8Q5MY95 495 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 C9orf135Q5VTT2 229 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 ZNF613Q6PF04 617 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 ZNF704Q6ZNC4 412 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-207ENST00000553831 CREB3L2Q70SY1 520 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 AAED1Q7RTV5 226 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-207ENST00000553831 EPHX4Q8IUS5 362 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 KDM8Q8N371 416 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 OR2T12Q8NG77 320 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 ZNF417Q8TAU3 575 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 RASSF5Q8WWW0 418 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 ZNF587Q96SQ5 575 aaPredicted RBP12.53□□□□□ -0.4
PRKCH-207ENST00000553831 MYLK2Q9H1R3 596 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 CXXC4Q9H2H0 198 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 CMTM6Q9NX76 183 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 GMPR2Q9P2T1 348 aaKnown RBP12.53□□□□□ -0.4
PRKCH-207ENST00000553831 B3GAT1Q9P2W7 334 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 UPB1Q9UBR1 384 aa12.53□□□□□ -0.4
PRKCH-207ENST00000553831 CIB4A0PJX0 185 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 OR5H1A6NKK0 313 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 LYPD3O95274 346 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 BGLAPP02818 100 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 THY1P04216 161 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 TNFRSF1BP20333 461 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 SELENOPP49908 381 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 GNGT1P63211 74 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 PPA1Q15181 289 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 DEFB113Q30KQ7 82 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 LRRC23Q53EV4 343 aaPredicted RBP12.52□□□□□ -0.41
PRKCH-207ENST00000553831 TIMM23BQ5SRD1 257 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 WDR88Q6ZMY6 472 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 ARPINQ7Z6K5 226 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 CARM1Q86X55 608 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 SLC15A3Q8IY34 581 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 MICU2Q8IYU8 434 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 ADAMTS16Q8TE57 1224 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 PROX1Q92786 737 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 ALPK1Q96QP1 1244 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 EPYCQ99645 322 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 TMEM204Q9BSN7 226 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 TMEM43Q9BTV4 400 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 PCDHAC1Q9H158 963 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 NPAP1Q9NZP6 1156 aa12.52□□□□□ -0.41
PRKCH-207ENST00000553831 ITPR3Q14573 2671 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 ELOVL7A1L3X0 281 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 GMNCA6NCL1 334 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 LRRN3E7EW58 273 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 ZNF43P17038 809 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 NUDT2P50583 147 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 SLC7A2P52569 658 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 LTBQ06643 244 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 LGALS3BPQ08380 585 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 MFSD13AQ14CX5 517 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 GABRA6Q16445 453 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 ACKR1Q16570 336 aa12.51□□□□□ -0.41
PRKCH-207ENST00000553831 NCMAPQ5T1S8 102 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms