RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 DVL2O14641 736 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 TXNDC12O95881 172 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 GYPBP06028 91 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 CTSBP07858 339 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 TACSTD2P09758 323 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 UBL4AP11441 157 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 EPXP11678 715 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 ARSBP15848 533 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 AVPR2P30518 371 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 ACVR1BP36896 505 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 SLC6A8P48029 635 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 FNTBP49356 437 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 PGDP52209 483 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 RAG2P55895 527 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 MAZP56270 477 aaKnown RBP11.8□□□□□ -0.52
SHMT2-205ENST00000553474 RRAS2P62070 204 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-205ENST00000553474 BTG2P78543 158 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 HSPB2Q16082 182 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 YIF1BQ5BJH7 314 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 SSX6Q7RTT6 188 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 ATG4DQ86TL0 474 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-205ENST00000553474 FRMD1Q8N878 549 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 ADAMTS14Q8WXS8 1223 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 UPRTQ96BW1 309 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 RNF170Q96K19 258 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 RANGRFQ9HD47 186 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-205ENST00000553474 PRMT8Q9NR22 394 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-205ENST00000553474 MRPL39Q9NYK5 338 aaKnown RBP11.8□□□□□ -0.52
SHMT2-205ENST00000553474 SPATA2Q9UM82 520 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 ALG5Q9Y673 324 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 SPAG17Q6Q759 2223 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 NUP210LQ5VU65 1888 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF318Q5VUA4 2279 aa11.8□□□□□ -0.52
SHMT2-205ENST00000553474 FRG2CA6NGY1 282 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 TMEM150CB9EJG8 249 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 INMT-MINDY4F8WBC2 141 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 SCDO00767 359 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 ITGA10O75578 1167 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CDC123O75794 336 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 TPPPO94811 219 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 DHFRP00374 187 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 C1QBP02746 253 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CLPSP04118 112 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CD14P08571 375 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 MAOAP21397 527 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CD38P28907 300 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CD1CP29017 333 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 SDHAP31040 664 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 RORAP35398 523 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 MAT1AQ00266 395 aaKnown RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 SKP2Q13309 424 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF74Q16587 644 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 TP53I3Q53FA7 332 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 PLCZ1Q86YW0 608 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 SLC35F3Q8IY50 421 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 NLGN4YQ8NFZ3 816 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CADM4Q8NFZ8 388 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 HSPA12BQ96MM6 686 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 GON7Q9BXV9 100 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 ABCG5Q9H222 651 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 NANSQ9NR45 359 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 AKAP7Q9P0M2 348 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 NCDNQ9UBB6 729 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 RBMX2Q9Y388 322 aaKnown RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CACNG2Q9Y698 323 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 IGHV1OR15-9A0A0B4J2B8 117 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 C17orf105B2RV13 164 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 ZNF264O43296 627 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 GSTZ1O43708 216 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 MAPK3P27361 379 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 SLC37A1P57057 533 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 OR10A3P58181 314 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 HNRNPKP61978 463 aaKnown RBP eCLIP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 RACK1P63244 317 aaKnown RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 RPL6Q02878 288 aaKnown RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 GPR176Q14439 515 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 PLA1AQ53H76 456 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 FAM27D1Q5T7N8 215 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 OGFOD3Q6PK18 319 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 RPTNQ6XPR3 784 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 SLC16A9Q7RTY1 509 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 JAZF1Q86VZ6 243 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 ABCA7Q8IZY2 2146 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 UBE2J2Q8N2K1 259 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 EID2Q8N6I1 236 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 AKAP1Q92667 903 aaKnown RBP eCLIP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 THRSPQ92748 146 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 NMNAT3Q96T66 252 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 GTPBP2Q9BX10 602 aaKnown RBP11.79□□□□□ -0.52
SHMT2-205ENST00000553474 SOHLH2Q9NX45 425 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 GNG8Q9UK08 70 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 CAMK2AQ9UQM7 478 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 ADAM18Q9Y3Q7 739 aa11.79□□□□□ -0.52
SHMT2-205ENST00000553474 MPDZO75970 2070 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 SPTBP11277 2137 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 IGKV1D-42A0A075B6H8 117 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 A0A1W2PQD3 144 aa11.78□□□□□ -0.52
SHMT2-205ENST00000553474 A0A1W2PR77 199 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms