RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ULK3Q6PHR2 472 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 CREB3L2Q70SY1 520 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 LSRQ86X29 649 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 ARMC8Q8IUR7 673 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 C11orf65Q8NCR3 313 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 NEUROG1Q92886 237 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 SLC25A36Q96CQ1 311 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 TRMT61AQ96FX7 289 aaKnown RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 ANKRD27Q96NW4 1050 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 RSPO3Q9BXY4 272 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 MRGBPQ9NV56 204 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 FAIMQ9NVQ4 179 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 CISD1Q9NZ45 108 aaKnown RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 NPAP1Q9NZP6 1156 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 SELENONQ9NZV5 590 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 TESQ9UGI8 421 aaKnown RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 AMDHD2Q9Y303 409 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 USF3Q68DE3 2245 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 A0A1B0GWA3 101 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 SHISA9B4DS77 424 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 OVOL3O00110 214 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 ABCD4O14678 606 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 FZD7O75084 574 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 KRT33AO76009 404 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 SOD3P08294 240 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 TROVE2P10155 538 aaKnown RBP eCLIP11.38□□□□□ -0.59
ACTN1-207ENST00000553290 HTR2AP28223 471 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 CDH11P55287 796 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 RGS8P57771 180 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-207ENST00000553290 NFYCQ13952 458 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 CYP51A1Q16850 503 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 GLIPR1L2Q4G1C9 344 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 ALG10BQ5I7T1 473 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 FAM69AQ5T7M9 428 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 C9orf135Q5VTT2 229 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 NET1Q7Z628 596 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-207ENST00000553290 RETREG3Q86VR2 466 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 COMTD1Q86VU5 262 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 SLC30A8Q8IWU4 369 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 SLC38A4Q969I6 547 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 SLC47A1Q96FL8 570 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 BOD1Q96IK1 185 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 PTDSS2Q9BVG9 487 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 GRIP2Q9C0E4 1043 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 TMEM27Q9HBJ8 222 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 SLC17A5Q9NRA2 495 aa11.38□□□□□ -0.59
ACTN1-207ENST00000553290 MAGED1Q9Y5V3 778 aaPredicted RBP11.38□□□□□ -0.59
ACTN1-207ENST00000553290 TRAV36DV7A0A075B6V5 113 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 A0A1W2PR80 420 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 H7C1Q1 480 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 AIM2O14862 343 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 MFN2O95140 757 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 WNT11O96014 354 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 C8BP07358 591 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF43P17038 809 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 CD40P25942 277 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 AQP1P29972 269 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF83P51522 516 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 PCBP3P57721 371 aaKnown RBP11.37□□□□□ -0.59
ACTN1-207ENST00000553290 DMTNQ08495 405 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 MFSD13AQ14CX5 517 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 ETFDHQ16134 617 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 PGGHGQ32M88 737 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 KLHL24Q6TFL4 600 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 RANBP3LQ86VV4 465 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-207ENST00000553290 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 DEPDC4Q8N2C3 294 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 PIAS4Q8N2W9 510 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-207ENST00000553290 WDR31Q8NA23 367 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 OR6S1Q8NH40 331 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 TAAR8Q969N4 342 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
ACTN1-207ENST00000553290 KTI12Q96EK9 354 aaPredicted RBP11.37□□□□□ -0.59
ACTN1-207ENST00000553290 COX4I2Q96KJ9 171 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 OXGR1Q96P68 337 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 EPYCQ99645 322 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 TMEM120AQ9BXJ8 343 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 LINC00470Q9BZP3 86 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 ALG2Q9H553 416 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 KAT8Q9H7Z6 458 aaKnown RBP11.37□□□□□ -0.59
ACTN1-207ENST00000553290 B3GALT5Q9Y2C3 310 aa11.37□□□□□ -0.59
ACTN1-207ENST00000553290 A0A087WUJ7 227 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 A0A0B4J2E0 115 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 A0A1B0GX12 115 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 ZNF587BE7ETH6 402 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 M0QX08 132 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 M0R1B8 84 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 LGI1O95970 557 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 PAX7P23759 505 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 SELENOPP49908 381 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 MTPNP58546 118 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 PRPS1P60891 318 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 CYLC2Q14093 348 aaPredicted RBP11.36□□□□□ -0.59
ACTN1-207ENST00000553290 SELPLGQ14242 412 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 OR1Q1Q15612 314 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 SWT1Q5T5J6 900 aaKnown RBP11.36□□□□□ -0.59
ACTN1-207ENST00000553290 INTS11Q5TA45 600 aaKnown RBP11.36□□□□□ -0.59
ACTN1-207ENST00000553290 AGAP6Q5VW22 663 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 NIPAL3Q6P499 406 aa11.36□□□□□ -0.59
ACTN1-207ENST00000553290 SLC22A25Q6T423 547 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms