RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SLC10A7Q0GE19 358 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 GPR50Q13585 617 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 PCK2Q16822 640 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 DEFB110Q30KQ9 67 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 UTF1Q5T230 341 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 LRRC66Q68CR7 880 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 SCYL2Q6P3W7 929 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 TRAT1Q6PIZ9 186 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 BNIPLQ7Z465 357 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 PRSS42Q7Z5A4 293 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 CCDC71Q8IV32 467 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-217ENST00000553287 NPWQ8N729 165 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF397Q8NF99 534 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-217ENST00000553287 FAM172AQ8WUF8 416 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ECHDC3Q96DC8 303 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 COX14Q96I36 57 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 CYYR1Q96J86 154 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF641Q96N77 438 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF396Q96N95 335 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ZIM3Q96PE6 472 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 GBP5Q96PP8 586 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 AP1M1Q9BXS5 423 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 NLNQ9BYT8 704 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 OR2AG1Q9H205 316 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 S100A14Q9HCY8 104 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 MED17Q9NVC6 651 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 SOHLH2Q9NX45 425 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ARMCX1Q9P291 453 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ATXN10Q9UBB4 475 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ATRQ13535 2644 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 DOCK10Q96BY6 2186 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 STAB1Q9NY15 2570 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 JMJD1CQ15652 2540 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 OR6C74A6NCV1 312 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 SLC9B1P1A6NJY1 282 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 CLN5O75503 358 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 SIX3O95343 332 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 ALPPP05187 535 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 KLK3P07288 261 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 PIRTP0C851 137 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 PRG2P13727 222 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 XRCC1P18887 633 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 PBLDP30039 288 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 SOAT1P35610 550 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 ID1P41134 155 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 CA7P43166 264 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 KPNA2P52292 529 aaKnown RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 OTUD4Q01804 1114 aaKnown RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 NAAAQ02083 359 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF235Q14590 738 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 NCF4Q15080 339 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 LTB4RQ15722 352 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF789Q5FWF6 425 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 LIPJQ5W064 366 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 REP15Q6BDI9 236 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 CASC4Q6P4E1 433 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 IGFL3Q6UXB1 125 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 TMEM64Q6YI46 380 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 PARP8Q8N3A8 854 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 CLEC1AQ8NC01 280 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 WFDC11Q8NEX6 87 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 CXorf40BQ96DE9 158 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 ERGIC2Q96RQ1 377 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 TSG101Q99816 390 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 C17orf62Q9BQA9 187 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 ATG101Q9BSB4 218 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 YTHDF1Q9BYJ9 559 aaKnown RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 UCK2Q9BZX2 261 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 CLSTN2Q9H4D0 955 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 LRRC19Q9H756 370 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 SLC40A1Q9NP59 571 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 DHCR7Q9UBM7 475 aaKnown RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 SEC14L3Q9UDX4 400 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 PLEKHA6Q9Y2H5 1048 aa3.41□□□□□ -1.86
ATXN3-217ENST00000553287 FN1P02751 2386 aaKnown RBP3.41□□□□□ -1.86
ATXN3-217ENST00000553287 NCOA6Q14686 2063 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-217ENST00000553287 CACNA1CQ13936 2221 aa3.4□□□□□ -1.86
ATXN3-217ENST00000553287 TRAV9-2A0A087WT02 112 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 SRRM4A7MD48 611 aaKnown RBP3.4□□□□□ -1.87
ATXN3-217ENST00000553287 ZNF724A8MTY0 619 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 CTDSPLO15194 276 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 JCHAINP01591 159 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 SKILP12757 684 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 GP5P40197 560 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 ALDH3B1P43353 468 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 FHITP49789 147 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 IGLV3-21P80748 117 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-217ENST00000553287 CRMP1Q14194 572 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 HSP90AA4PQ58FG1 418 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 ALKBH5Q6P6C2 394 aaKnown RBP3.4□□□□□ -1.87
ATXN3-217ENST00000553287 WDR59Q6PJI9 974 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 RAB43Q86YS6 212 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 ZNF547Q8IVP9 402 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 PRSS58Q8IYP2 241 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 BCORP1Q8N888 145 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 SAMD12Q8N8I0 201 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 PIH1D2Q8WWB5 315 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 CKAP2Q8WWK9 683 aa3.4□□□□□ -1.87
ATXN3-217ENST00000553287 CCDC47Q96A33 483 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms