RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 GRPRP30550 384 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ADH7P40394 386 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 KIAA1024LP59773 190 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 DHODHQ02127 395 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 OC90Q02509 493 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 BTN1A1Q13410 526 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 HTR4Q13639 388 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 MELKQ14680 651 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ELFN2Q5R3F8 820 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 CTRB2Q6GPI1 263 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 RGS7BPQ6MZT1 257 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 PWWP2BQ6NUJ5 590 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ALKAL2Q6UX46 152 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 C3P1Q6ZMU1 363 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 MTSS1LQ765P7 747 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 PAQR7Q86WK9 346 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SPICQ8N5J4 248 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ZNF433Q8N7K0 673 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 OR4K14Q8NGD5 310 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 THEM6Q8WUY1 208 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SMARCD2Q92925 531 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 RAB7BQ96AH8 199 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ZNF707Q96C28 371 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 TSPAN10Q9H1Z9 355 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 PPA2Q9H2U2 334 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 NOX3Q9HBY0 568 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 NCDNQ9UBB6 729 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 OR5V1Q9UGF6 321 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 CHRNA9Q9UGM1 479 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ING1Q9UK53 422 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 C19orf53Q9UNZ5 99 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 TRBV23OR9-2A0A075B6M9 112 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SLC22A23A1A5C7 686 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 LRRC72A6NJI9 287 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 GPR89AB7ZAQ6 455 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 GABARAPH6UMI1 98 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 GPR37O15354 613 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SIGLEC5O15389 551 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 FGF17O60258 216 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ZFPL1O95159 310 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 GPR89BP0CG08 455 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SMIM10L1P0DMW3 83 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 VSIG10L2P0DP72 767 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ICAM2P13598 275 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 CPN1P15169 458 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ADRA2CP18825 462 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ACAA2P42765 397 aaKnown RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 P2RX1P51575 399 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 GBX2P52951 348 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 AP3S2P59780 193 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 UBE2MP61081 183 aaKnown RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SIGLEC14Q08ET2 396 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 NOGQ13253 232 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 FAM53BQ14153 422 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 GLDNQ6ZMI3 551 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 DGAT2L6Q6ZPD8 337 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 IQCF2Q8IXL9 164 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SLC35F2Q8IXU6 374 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SAMD14Q8IZD0 417 aaPredicted RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 OR6V1Q8N148 313 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SYS1Q8N2H4 156 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 EID2Q8N6I1 236 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 COX18Q8N8Q8 333 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 DNAAF1Q8NEP3 725 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 OR5T3Q8NGG3 340 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 OR6M1Q8NGM8 313 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SUSD6Q92537 303 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 PHYHIPQ92561 330 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 GAL3ST3Q96A11 431 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SMIM10Q96HG1 83 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 NMNAT3Q96T66 252 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ZNF426Q9BUY5 554 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SHARPINQ9H0F6 387 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 LIN7BQ9HAP6 207 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 CAPN10Q9HC96 672 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 C12orf4Q9NQ89 552 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ZNF69Q9UC07 566 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 SERTAD3Q9UJW9 196 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 FOXJ3Q9UPW0 622 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 BAIAP2Q9UQB8 552 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 MRPS23Q9Y3D9 190 aaKnown RBP4.97□□□□□ -1.61
LIMA1-212ENST00000552491 IER3IP1Q9Y5U9 82 aa4.97□□□□□ -1.61
LIMA1-212ENST00000552491 ARID1BQ8NFD5 2236 aaPredicted RBP4.96□□□□□ -1.61
LIMA1-212ENST00000552491 A0A1B0GTH9 108 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 A0A1W2PP55 124 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ANKRD20A5PA0PJZ0 165 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR6C68A6NDL8 312 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 ZNF879B4DU55 563 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 C1QTNF3-AMACRE9PGA6 284 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 PYCARD-AS1I3L0S3 204 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 L7N2F9 121 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 AIPO00170 330 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 NUPL2O15504 423 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 SUSD5O60279 629 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 BRINP1O60477 761 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 TMEM127O75204 238 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 KHDRBS3O75525 346 aaKnown RBP4.96□□□□□ -1.62
LIMA1-212ENST00000552491 KRT33AO76009 404 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 OR2A4O95047 310 aa4.96□□□□□ -1.62
LIMA1-212ENST00000552491 IFNGP01579 166 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms