RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 THBS4P35443 961 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 SELENOPP49908 381 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 ACTG1P63261 375 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 TXNL4AP83876 142 aaKnown RBP12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 LGALS3BPQ08380 585 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 EPS8Q12929 822 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 RIN1Q13671 783 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 ADRM1Q16186 407 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 PRAMEF8Q5VWM4 474 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 PRAMEF7Q5VXH5 474 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 NIPAL3Q6P499 406 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 CREB3L2Q70SY1 520 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 DOK1Q99704 481 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 SLC35A5Q9BS91 424 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 METTL17Q9H7H0 456 aaPredicted RBP12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 MTHFD2LQ9H903 347 aaPredicted RBP12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 ADPRHL2Q9NX46 363 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 SLC17A7Q9P2U7 560 aa12.29□□□□□ -0.44
CHMP1A-210ENST00000551981 PRAMEF27A3QJZ7 478 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 A8MVM7 634 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 VENTXO95231 258 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 CBR1P16152 277 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 ARRB2P32121 409 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 ARR3P36575 388 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 COPZ1P61923 177 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 IL1RL1Q01638 556 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 ROR2Q01974 943 aaKnown RBP12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 HGFACQ04756 655 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 CCNIQ14094 377 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 TRIP10Q15642 601 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 DPY19L1Q2PZI1 675 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 MRPL2Q5T653 305 aaKnown RBP12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 SHQ1Q6PI26 577 aaKnown RBP12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 DEF8Q6ZN54 512 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 LRRC74BQ6ZQY2 392 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 RNF130Q86XS8 419 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 ZCCHC24Q8N2G6 241 aaKnown RBP12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 TRIML2Q8N7C3 387 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 ANKFN1Q8N957 763 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 ANKK1Q8NFD2 765 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 CKAP2Q8WWK9 683 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 TESCQ96BS2 214 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 LINC00470Q9BZP3 86 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 SLC38A1Q9H2H9 487 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 RASD1Q9Y272 281 aa12.28□□□□□ -0.44
CHMP1A-210ENST00000551981 A0A096LPI6 279 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 TLDC2A0PJX2 215 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 SH3PXD2BA1X283 911 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 UPK3AO75631 287 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 CHRM4P08173 479 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 ADRA2AP08913 450 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 RPS4Y1P22090 263 aaKnown RBP12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 DAG1Q14118 895 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 CASP8Q14790 479 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 SYPL1Q16563 259 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 C1orf140Q5VVS0 124 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 WBP2NLQ6ICG8 309 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 LINGO2Q7L985 606 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 EPHX4Q8IUS5 362 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 PEX5LQ8IYB4 626 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 CADM2Q8N3J6 435 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 C3orf56Q8N813 242 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 EIF1ADQ8N9N8 165 aaKnown RBP12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 IL17RDQ8NFM7 739 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 SEMA6DQ8NFY4 1073 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 SGMS2Q8NHU3 365 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 TCP10LQ8TDR4 215 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 ZNF418Q8TF45 676 aaPredicted RBP12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 AKTIPQ9H8T0 292 aa12.27□□□□□ -0.45
CHMP1A-210ENST00000551981 IGHV2OR16-5A0A0B4J2B6 119 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 FRS3O43559 492 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 SLC43A1O75387 559 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 SPAG7O75391 227 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 CELA3BP08861 270 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 TFPTP0C1Z6 253 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 NR2F1P10589 423 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 COMPP49747 757 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 P2RY4P51582 365 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 ARF1P84077 181 aaKnown RBP12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 POU3F1Q03052 451 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 NPRL3Q12980 569 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 BNIP2Q12982 314 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 SNTB2Q13425 540 aaKnown RBP12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 PDCD2Q16342 344 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 FAM174BQ3ZCQ3 159 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 LSRQ86X29 649 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 CCDC36Q8IYA8 594 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 CDK20Q8IZL9 346 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 RIBC1Q8N443 379 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 PPP1R36Q96LQ0 422 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 CCDC115Q96NT0 180 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 NELFAQ9H3P2 528 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 BTNL2Q9UIR0 455 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 RCE1Q9Y256 329 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 GRIP1Q9Y3R0 1128 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 CMAHPQ9Y471 501 aa12.26□□□□□ -0.45
CHMP1A-210ENST00000551981 PKD1L1Q8TDX9 2849 aa12.25□□□□□ -0.45
CHMP1A-210ENST00000551981 TMEM129A0AVI4 362 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms