RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 CDH20Q9HBT6 801 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 MRPS30Q9NP92 439 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SERINC1Q9NRX5 453 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TXLNGQ9NUQ3 528 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CHCHD3Q9NX63 227 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 WWOXQ9NZC7 414 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 IFNKQ9P0W0 207 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TXNDC16Q9P2K2 825 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 B3GAT1Q9P2W7 334 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 CLCF1Q9UBD9 225 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF629Q9UEG4 869 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TAC3Q9UHF0 121 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PCYOX1Q9UHG3 505 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF639Q9UID6 485 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SH3BGRL2Q9UJC5 107 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 SLC7A7Q9UM01 511 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 PACSIN2Q9UNF0 486 aaPredicted RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 TDRKHQ9Y2W6 561 aaKnown RBP2.07□□□□□ -2.08
CPSF6-207ENST00000551516 NAALAD2Q9Y3Q0 740 aa2.07□□□□□ -2.08
CPSF6-207ENST00000551516 A0A1W2PPI3 338 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 A0A1W2PPW3 197 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 OOEPA6NGQ2 149 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 FRG2CA6NGY1 282 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF860A6NHJ4 632 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SDR42E2A6NKP2 422 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 C17orf51A8MQB3 221 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 A8MUI8 341 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 GOLGA8KD6RF30 607 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 C16orf97H3BN30 126 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 GOLGA8TH3BQL2 631 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PES1O00541 588 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ACOT8O14734 319 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 NDC80O14777 642 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 KCNAB3O43448 404 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CTNSO60931 367 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CDC123O75794 336 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 OR2J2O76002 312 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RCBTB2O95199 551 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 GOSR1O95249 250 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 VAPBO95292 243 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 TGM6O95932 706 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RAF1P04049 648 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 HPNP05981 417 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CSN3P07498 182 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 HEXBP07686 556 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SERPINA6P08185 405 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 IGFBP1P08833 259 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 FAM58BPP0C7Q3 252 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 OR56A5P0C7T3 313 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RALBP11234 206 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 IRF2P14316 349 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CPN1P15169 458 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ADRA2CP18825 462 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 GNAZP19086 355 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 OGNP20774 298 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 MPZP25189 248 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 EPHA2P29317 976 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PTPN6P29350 595 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 HSD17B2P37059 387 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 MNDAP41218 407 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 WNT5AP41221 380 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SOX3P41225 446 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 MAP3K8P41279 467 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ZFP36L2P47974 494 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CYB561P49447 251 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 THBS3P49746 956 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 LHX2P50458 406 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CDH11P55287 796 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CLDN18P56856 261 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 HSD17B7P56937 341 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 LINC00205P59089 165 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RPS15AP62244 130 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 TBPL1P62380 186 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 PPIAP62937 165 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 DLK1P80370 383 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RPL24P83731 157 aaKnown RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 POU3F1Q03052 451 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CUL1Q13616 776 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 VEZF1Q14119 521 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 C18orf21Q32NC0 220 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 KRTAP24-1Q3LI83 254 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 FAM174BQ3ZCQ3 159 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 DEFB134Q4QY38 66 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ANKRD20A4Q4UJ75 823 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CES4AQ5XG92 561 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 FAM219BQ5XKK7 198 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 CAPN13Q6MZZ7 669 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ADAM5Q6NVV9 412 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 NEPROQ6NW34 567 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SPSB3Q6PJ21 355 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 RGS9BPQ6ZS82 235 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 TAS2R42Q7RTR8 314 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 C16orf82Q7Z2V1 217 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 NUP54Q7Z3B4 507 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 KIAA1328Q86T90 577 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 ZNF554Q86TJ5 538 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 HOOK3Q86VS8 718 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SNX32Q86XE0 403 aa2.06□□□□□ -2.08
CPSF6-207ENST00000551516 SLC13A5Q86YT5 568 aaPredicted RBP2.06□□□□□ -2.08
CPSF6-207ENST00000551516 HIPK1Q86Z02 1210 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms