RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 RNF217Q8TC41 542 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 ADAMTS16Q8TE57 1224 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 SLC25A36Q96CQ1 311 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 CCT8L2Q96SF2 557 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 SH3GLB1Q9Y371 365 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 CORINQ9Y5Q5 1042 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 CCDC168Q8NDH2 2452 aa13.64□□□□□ -0.23
PRPF40B-211ENST00000551063 DCHS2Q6V1P9 2916 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 POLQO75417 2590 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 CSMD2Q7Z408 3487 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 F8P00451 2351 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 DEFB108AA8MXU0 73 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 CXCR6O00574 342 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 LYPD3O95274 346 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 FAM107AO95990 144 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 THBDP07204 575 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 GRPRP30550 384 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 SELENOWP63302 87 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 GKAP1Q5VSY0 366 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 ANKRD34AQ69YU3 496 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 LINC00114Q6XXX2 140 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 SSX8Q7RTT4 187 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 GPAT4Q86UL3 456 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 CDC20BQ86Y33 519 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 LZICQ8WZA0 190 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 TAAR8Q969N4 342 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 S100PBPQ96BU1 408 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 SLC19A3Q9BZV2 496 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 C6orf203Q9P0P8 240 aaPredicted RBP13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 GMPR2Q9P2T1 348 aaKnown RBP13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 TAGLN3Q9UI15 199 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 B3GALT5Q9Y2C3 310 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 MPDZO75970 2070 aa13.63□□□□□ -0.23
PRPF40B-211ENST00000551063 M0R082 166 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 SHOX2O60902 331 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 OR5F1O95221 314 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 MT-ATP6P00846 226 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 BGLAPP02818 100 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 THY1P04216 161 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 NTF4P34130 210 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 BEX5Q5H9J7 111 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 C22orf34Q6ZV56 151 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 BHLHA15Q7RTS1 189 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 TSPYL5Q86VY4 417 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 P3H2Q8IVL5 708 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 ZIC4Q8N9L1 334 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 SCAIQ8N9R8 606 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 ZNF417Q8TAU3 575 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 SLC41A3Q96GZ6 507 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 ZC3HAV1LQ96H79 300 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 ZNF385AQ96PM9 386 aaKnown RBP13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 ZNF587Q96SQ5 575 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 KCTD14Q9BQ13 255 aaPredicted RBP13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 ZNF426Q9BUY5 554 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 ASB6Q9NWX5 421 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 TAS2R16Q9NYV7 291 aa13.62□□□□□ -0.23
PRPF40B-211ENST00000551063 AKAP9Q99996 3911 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 LOC102725191A0A1B0GVB3 256 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 OR6C65A6NJZ3 312 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 GSTA4O15217 222 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 SIAH2O43255 324 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 LYZL6O75951 148 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 IGHV3-9P01782 118 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 THRBP10828 461 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 TNFRSF1BP20333 461 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 IGHV1-2P23083 117 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 NR1H2P55055 460 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 TAS2R41P59536 307 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 TTC33Q6PID6 262 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 WDR88Q6ZMY6 472 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 DEF8Q6ZN54 512 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 CREB3L2Q70SY1 520 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 H1FNTQ75WM6 255 aaPredicted RBP13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 AAED1Q7RTV5 226 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 EPHX4Q8IUS5 362 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 UBE2J2Q8N2K1 259 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 POMGNT2Q8NAT1 580 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 CCDC197Q8NCU1 140 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 NINJ1Q92982 152 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 TPD52L3Q96J77 140 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 OXGR1Q96P68 337 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 ASPNQ9BXN1 380 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 NDE1Q9NXR1 346 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 MRPL39Q9NYK5 338 aaKnown RBP13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 B3GAT1Q9P2W7 334 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 SLC7A7Q9UM01 511 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 EDARQ9UNE0 448 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 RCE1Q9Y256 329 aa13.61□□□□□ -0.23
PRPF40B-211ENST00000551063 PDLIM1O00151 329 aa13.6□□□□□ -0.23
PRPF40B-211ENST00000551063 AKAP8O43823 692 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-211ENST00000551063 ZNF43P17038 809 aa13.6□□□□□ -0.23
PRPF40B-211ENST00000551063 GGT1P19440 569 aa13.6□□□□□ -0.23
PRPF40B-211ENST00000551063 RBM34P42696 430 aaKnown RBP13.6□□□□□ -0.23
PRPF40B-211ENST00000551063 MNAT1P51948 309 aa13.6□□□□□ -0.23
PRPF40B-211ENST00000551063 LTBQ06643 244 aa13.6□□□□□ -0.23
PRPF40B-211ENST00000551063 KRT72Q14CN4 511 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms