RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 ING1Q9UK53 422 aaPredicted RBP14.45□□□□□ -0.1
CHMP1A-209ENST00000550872 TCRBV5S2A0A599 114 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 AQP7P3A6NL99 342 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF724A8MTY0 619 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 LRRN3E7EW58 273 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 M0R082 166 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 GPR171O14626 319 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 MSTNO14793 375 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 DIRAS1O95057 198 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 BGLAPP02818 100 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 SEMG1P04279 462 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 UGT2B15P54855 530 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 LTBQ06643 244 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 NUFIP2Q7Z417 695 aaKnown RBP14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 PIK3C3Q8NEB9 887 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF417Q8TAU3 575 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 TMEM239Q8WW34 195 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 POP5Q969H6 163 aaKnown RBP14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 LRRC46Q96FV0 321 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF587Q96SQ5 575 aaPredicted RBP14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 ASPNQ9BXN1 380 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 KLHL4Q9C0H6 718 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 OPN3Q9H1Y3 402 aaPredicted RBP14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 LRMDAQ9H2I8 198 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 C12orf49Q9H741 205 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 NMNAT1Q9HAN9 279 aaPredicted RBP14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 PLSCR4Q9NRQ2 329 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 EMC3Q9P0I2 261 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 PLEKHB1Q9UF11 243 aaPredicted RBP14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 MED31Q9Y3C7 131 aa14.44□□□□□ -0.1
CHMP1A-209ENST00000550872 IGKV3D-15A0A087WSY6 115 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF716A6NP11 495 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 A8MXE2 369 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 PRSS23O95084 383 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 VAMP5O95183 116 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 CH25HO95992 272 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 CGAP01215 116 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 MT-ND1P03886 318 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 FABP3P05413 133 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 H1F0P07305 194 aaKnown RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 CD8BP10966 210 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 FUT4P22083 530 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 GRNP28799 593 aaKnown RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 SLC16A1P53985 500 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 FLOT2Q14254 428 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 SLC17A1Q14916 467 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 IQCCQ4KMZ1 466 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 H1FNTQ75WM6 255 aaPredicted RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 GALNT5Q7Z7M9 940 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 GPAT4Q86UL3 456 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 ZDHHC21Q8IVQ6 265 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF610Q8N9Z0 462 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 PFN4Q8NHR9 129 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 MOGAT1Q96PD6 335 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 PIP5K1AQ99755 562 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 SF3B5Q9BWJ5 86 aaKnown RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 RBM24Q9BX46 236 aaKnown RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 MMADHCQ9H3L0 296 aaPredicted RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 CHST11Q9NPF2 352 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 IL1RAPQ9NPH3 570 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 MEPEQ9NQ76 525 aaPredicted RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 MAN2C1Q9NTJ4 1040 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 JKAMPQ9P055 326 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 SEC14L4Q9UDX3 406 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 SLC7A8Q9UHI5 535 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 POMPQ9Y244 141 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 RASD1Q9Y272 281 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 B3GALT5Q9Y2C3 310 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 NOSIPQ9Y314 301 aaKnown RBP14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 CORINQ9Y5Q5 1042 aa14.43□□□□□ -0.1
CHMP1A-209ENST00000550872 FREM1Q5H8C1 2179 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 AQP12BA6NM10 295 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 ENO4A6NNW6 628 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 C19orf84I3L1E1 186 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 FZD7O75084 574 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 MT-ATP6P00846 226 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 NQO1P15559 274 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 UQCRC1P31930 480 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 P2RY4P51582 365 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 IL1RL1Q01638 556 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 CHRNB3Q05901 458 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 TFF3Q07654 80 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 PMS2P3Q13401 168 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 ZNF74Q16587 644 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 FBXL19-AS1Q494R0 122 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 FAM98BQ52LJ0 330 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 SP5Q6BEB4 398 aaPredicted RBP14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 LURAP1LQ8IV03 231 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 AQP12AQ8IXF9 295 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 KDM8Q8N371 416 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 OR9K2Q8NGE7 335 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 RNASE6Q93091 150 aaKnown RBP14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 SGTBQ96EQ0 304 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 ANKRD19PQ9H560 264 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 NANSQ9NR45 359 aa14.42□□□□□ -0.1
CHMP1A-209ENST00000550872 HCFC1P51610 2035 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 MYO9AB2RTY4 2548 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 A0A087WUU8 490 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 PIP5K1CO60331 668 aa14.41□□□□□ -0.1
CHMP1A-209ENST00000550872 HIST1H2ABP04908 130 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms