RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 ARMC1Q9NVT9 282 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 CLEC4AQ9UMR7 237 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 SLC5A6Q9Y289 635 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 MED31Q9Y3C7 131 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 AP4S1Q9Y587 144 aa11.63□□□□□ -0.55
RAB5C-206ENST00000550406 HCFC1P51610 2035 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 AQP7P3A6NL99 342 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 TNFRSF11BO00300 401 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 EIF1BO60739 113 aaKnown RBP11.62□□□□□ -0.55
RAB5C-206ENST00000550406 ENTPD5O75356 428 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 KRT36O76013 467 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 OR7A10O76100 309 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 HPRP00739 348 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 CST1P01037 141 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 IFI30P13284 250 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 NTF4P34130 210 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 KIR2DL2P43627 348 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-206ENST00000550406 OMPP47874 163 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 SMIM11AP58511 58 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 OTUD3Q5T2D3 398 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-206ENST00000550406 HMBOX1Q6NT76 420 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 ZER1Q7Z7L7 766 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 GCNT2Q8N0V5 402 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 KDM8Q8N371 416 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 OR4K5Q8NGD3 323 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 PYDC1Q8WXC3 89 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF775Q96BV0 537 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-206ENST00000550406 BPIFA2Q96DR5 249 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 SGTBQ96EQ0 304 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 PSD2Q9BQI7 771 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 NAA11Q9BSU3 229 aaPredicted RBP11.62□□□□□ -0.55
RAB5C-206ENST00000550406 PRRG4Q9BZD6 226 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 CHST11Q9NPF2 352 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 MRPL39Q9NYK5 338 aaKnown RBP11.62□□□□□ -0.55
RAB5C-206ENST00000550406 TAS2R5Q9NYW4 299 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 KLHL13Q9P2N7 655 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 B3GAT1Q9P2W7 334 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 RNF6Q9Y252 685 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 U3KQV3 271 aa11.62□□□□□ -0.55
RAB5C-206ENST00000550406 IGKV3D-15A0A087WSY6 115 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 PLPP3O14495 311 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 CDC42EP2O14613 210 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 CLOCKO15516 846 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 KLF4O43474 513 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 TNFSF13O75888 250 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 MT-ATP6P00846 226 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 LDLRP01130 860 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 IL2RAP01589 272 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 TSPAN19P0C672 248 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 TMIGD3P0DMS9 266 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-206ENST00000550406 HOXB6P17509 224 aaKnown RBP11.61□□□□□ -0.55
RAB5C-206ENST00000550406 SLC16A1P53985 500 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 RASGEF1BQ0VAM2 473 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 SLC17A1Q14916 467 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 LAPTM4AQ15012 233 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 PDK3Q15120 406 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF770Q6IQ21 691 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-206ENST00000550406 TMPRSS11FQ6ZWK6 438 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 H1FNTQ75WM6 255 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-206ENST00000550406 TUSC5Q8IXB3 177 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 SLC43A2Q8N370 569 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 C10orf53Q8N6V4 93 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 ZIC4Q8N9L1 334 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 OR5J2Q8NH18 312 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 ITLN2Q8WWU7 325 aaPredicted RBP11.61□□□□□ -0.55
RAB5C-206ENST00000550406 LRTOMTQ8WZ04 291 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 RND1Q92730 232 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 ZHX1-C8orf76Q96EF9 292 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 FAM46AQ96IP4 442 aaKnown RBP11.61□□□□□ -0.55
RAB5C-206ENST00000550406 KLHL4Q9C0H6 718 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 FKRPQ9H9S5 495 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 BCO1Q9HAY6 547 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 NANSQ9NR45 359 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 DNAJB9Q9UBS3 223 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF229Q9UJW7 825 aa11.61□□□□□ -0.55
RAB5C-206ENST00000550406 SAMHD1Q9Y3Z3 626 aaKnown RBP11.61□□□□□ -0.55
RAB5C-206ENST00000550406 UBR5O95071 2799 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-206ENST00000550406 ALPK2Q86TB3 2170 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 A0A1W2PNV4 684 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 HSPB2A8KAH6 182 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 ZG16O60844 167 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 SS18L1O75177 396 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-206ENST00000550406 CGAP01215 116 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 FCGR2AP12318 317 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 ZNF26P17031 533 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-206ENST00000550406 EDNRAP25101 427 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 CTSSP25774 331 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 GPR4P46093 362 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 MFSD13AQ14CX5 517 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 RNPS1Q15287 305 aaKnown RBP11.6□□□□□ -0.55
RAB5C-206ENST00000550406 HSPB2Q16082 182 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 MICAQ29983 383 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 ANKRD34AQ69YU3 496 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 C1orf94Q6P1W5 598 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 PGBD2Q6P3X8 592 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 VWA1Q6PCB0 445 aa11.6□□□□□ -0.55
RAB5C-206ENST00000550406 MAMDC2Q7Z304 686 aaPredicted RBP11.6□□□□□ -0.55
RAB5C-206ENST00000550406 NUFIP2Q7Z417 695 aaKnown RBP11.6□□□□□ -0.55
RAB5C-206ENST00000550406 BTLAQ7Z6A9 289 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms