RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 M0R082 166 aa20■□□□□ 0.79
BRF1-216ENST00000550208 KPNA4O00629 521 aaPredicted RBP20■□□□□ 0.79
BRF1-216ENST00000550208 FZD7O75084 574 aa20■□□□□ 0.79
BRF1-216ENST00000550208 THRBP10828 461 aa20■□□□□ 0.79
BRF1-216ENST00000550208 EDNRAP25101 427 aa20■□□□□ 0.79
BRF1-216ENST00000550208 ST3GAL3Q11203 375 aa20■□□□□ 0.79
BRF1-216ENST00000550208 EXOC3L2Q2M3D2 409 aa20■□□□□ 0.79
BRF1-216ENST00000550208 DNAL1Q4LDG9 190 aa20■□□□□ 0.79
BRF1-216ENST00000550208 ZC3HAV1Q7Z2W4 902 aaKnown RBP20■□□□□ 0.79
BRF1-216ENST00000550208 DMRTC2Q8IXT2 367 aaPredicted RBP20■□□□□ 0.79
BRF1-216ENST00000550208 ZIC4Q8N9L1 334 aa20■□□□□ 0.79
BRF1-216ENST00000550208 ZNF417Q8TAU3 575 aa20■□□□□ 0.79
BRF1-216ENST00000550208 ZNF587Q96SQ5 575 aaPredicted RBP20■□□□□ 0.79
BRF1-216ENST00000550208 SPOCK3Q9BQ16 436 aa20■□□□□ 0.79
BRF1-216ENST00000550208 SF3B5Q9BWJ5 86 aaKnown RBP20■□□□□ 0.79
BRF1-216ENST00000550208 MEPEQ9NQ76 525 aaPredicted RBP20■□□□□ 0.79
BRF1-216ENST00000550208 EMC3Q9P0I2 261 aa20■□□□□ 0.79
BRF1-216ENST00000550208 NOSIPQ9Y314 301 aaKnown RBP20■□□□□ 0.79
BRF1-216ENST00000550208 GPR171O14626 319 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 CH25HO95992 272 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 COX6B1P14854 86 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 GTF2E2P29084 291 aaKnown RBP19.99■□□□□ 0.79
BRF1-216ENST00000550208 IFNA8P32881 189 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 UGT2B15P54855 530 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 TFAP2EQ6VUC0 442 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 H1FNTQ75WM6 255 aaPredicted RBP19.99■□□□□ 0.79
BRF1-216ENST00000550208 GPAT4Q86UL3 456 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 DHFR2Q86XF0 187 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 OR9K2Q8NGE7 335 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 TMEM239Q8WW34 195 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 SLC19A3Q9BZV2 496 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 NDUFAF4Q9P032 175 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 C6orf203Q9P0P8 240 aaPredicted RBP19.99■□□□□ 0.79
BRF1-216ENST00000550208 RASD1Q9Y272 281 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 FLVCR1Q9Y5Y0 555 aa19.99■□□□□ 0.79
BRF1-216ENST00000550208 MS4A18H0YCH9 400 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 hCG_2039718K7EN88 272 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 PRSS23O95084 383 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 SEMG1P04279 462 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 CD79BP40259 229 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 RBM34P42696 430 aaKnown RBP19.98■□□□□ 0.79
BRF1-216ENST00000550208 VLDLRP98155 873 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 MFSD13AQ14CX5 517 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 MS4A18Q3C1V0 323 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 IQCCQ4KMZ1 466 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 PGM2L1Q6PCE3 622 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 OFCC1Q8IZS5 231 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 PFN4Q8NHR9 129 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 CCDC124Q96CT7 223 aaKnown RBP19.98■□□□□ 0.79
BRF1-216ENST00000550208 HS6ST2Q96MM7 605 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 MUC13Q9H3R2 512 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 MAN2C1Q9NTJ4 1040 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 ELOVL5Q9NYP7 299 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 PRSS50Q9UI38 385 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 B3GALT5Q9Y2C3 310 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 FAM32AQ9Y421 112 aaKnown RBP19.98■□□□□ 0.79
BRF1-216ENST00000550208 FREM1Q5H8C1 2179 aa19.98■□□□□ 0.79
BRF1-216ENST00000550208 GSC2O15499 205 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 DNAJC8O75937 253 aaPredicted RBP19.97■□□□□ 0.79
BRF1-216ENST00000550208 ATP5HO75947 161 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 DIRAS1O95057 198 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 VAMP5O95183 116 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 MT-ND1P03886 318 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 POU2F1P14859 743 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 OR3A2P47893 321 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 LSM11P83369 360 aaKnown RBP eCLIP19.97■□□□□ 0.79
BRF1-216ENST00000550208 PMS2P3Q13401 168 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 TRAM2Q15035 370 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 ZNF74Q16587 644 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 LCN8Q6JVE9 175 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 BEND4Q6ZU67 534 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 CREB3L2Q70SY1 520 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 STK32CQ86UX6 486 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 CYP4Z1Q86W10 505 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 KIF18BQ86Y91 864 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 EPHX4Q8IUS5 362 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 ZNF100Q8IYN0 542 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 LRRC17Q8N6Y2 441 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 PIK3C3Q8NEB9 887 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 ZNF385AQ96PM9 386 aaKnown RBP19.97■□□□□ 0.79
BRF1-216ENST00000550208 ASPNQ9BXN1 380 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 CADM1Q9BY67 442 aaKnown RBP19.97■□□□□ 0.79
BRF1-216ENST00000550208 CORINQ9Y5Q5 1042 aa19.97■□□□□ 0.79
BRF1-216ENST00000550208 TCRBV5S2A0A599 114 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 ACOT8O14734 319 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 MRPL33O75394 65 aaKnown RBP19.96■□□□□ 0.79
BRF1-216ENST00000550208 MT-ATP6P00846 226 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 RHCEP18577 417 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 LINC01560Q8TB33 94 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 ASB9Q96DX5 294 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 OXGR1Q96P68 337 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 NMNAT1Q9HAN9 279 aaPredicted RBP19.96■□□□□ 0.79
BRF1-216ENST00000550208 C20orf141Q9NUB4 165 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 MRPL39Q9NYK5 338 aaKnown RBP19.96■□□□□ 0.79
BRF1-216ENST00000550208 B3GAT1Q9P2W7 334 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 MED31Q9Y3C7 131 aa19.96■□□□□ 0.79
BRF1-216ENST00000550208 FLNBO75369 2602 aaKnown RBP19.96■□□□□ 0.79
BRF1-216ENST00000550208 ASH1LQ9NR48 2969 aaKnown RBP19.95■□□□□ 0.78
BRF1-216ENST00000550208 ENO4A6NNW6 628 aa19.95■□□□□ 0.78
BRF1-216ENST00000550208 PLPP3O14495 311 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms