RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 UQCRBP14927 111 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 NPR2P20594 1047 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 RPS4Y1P22090 263 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 APEX1P27695 318 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 CALCRP30988 508 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 IL2RGP31785 369 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 THBS4P35443 961 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 EVX1P49640 407 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 COMPP49747 757 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 SH3BGRP55822 239 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 TXNL4AP83876 142 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 POU3F1Q03052 451 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 EPS8Q12929 822 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 GNA13Q14344 377 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 LRRC74BQ6ZQY2 392 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 LINGO2Q7L985 606 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 EPHX4Q8IUS5 362 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 ZNF440Q8IYI8 595 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 EPS8L3Q8TE67 593 aaKnown RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 WDR60Q8WVS4 1066 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 APOPT1Q96IL0 206 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 ANKRD27Q96NW4 1050 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 SLC17A7Q9P2U7 560 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 MARCOQ9UEW3 520 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 SMIM23A6NLE4 172 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 A8MVM7 634 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 B4DSR2 109 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 J3QL48 77 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 hCG_2039718K7EN88 272 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 NR5A2O00482 541 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 SKAP2O75563 359 aaPredicted RBP8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 VENTXO95231 258 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 CPSF4O95639 269 aaKnown RBP8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 DBIP07108 87 aaKnown RBP8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 TFPTP0C1Z6 253 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 IL7RP16871 459 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 CXCR1P25024 350 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 ACAA2P42765 397 aaKnown RBP8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 SELENOPP49908 381 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 LGALS3BPQ08380 585 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 OR7A5Q15622 319 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 SYPL1Q16563 259 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 VHLLQ6RSH7 139 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 HMGN2P46Q86SG4 172 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 GPAT4Q86UL3 456 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 ANKRD46Q86W74 232 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 ZCCHC24Q8N2G6 241 aaKnown RBP8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 ANKFN1Q8N957 763 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 UBLCP1Q8WVY7 318 aaPredicted RBP8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 SNX18Q96RF0 628 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 RHOXF2Q9BQY4 288 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 DPY30Q9C005 99 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 NELFAQ9H3P2 528 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 AKTIPQ9H8T0 292 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 RASD1Q9Y272 281 aa8.52□□□□□ -1.05
TRAFD1-207ENST00000550051 TENM1Q9UKZ4 2725 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 CDHR4A6H8M9 788 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 NPIPB7O75200 414 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 UPK3AO75631 287 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 C1QCP02747 245 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 BPGMP07738 259 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 CHRM4P08173 479 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 IFNGR1P15260 489 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 EGR1P18146 543 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 CHI3L1P36222 383 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 ARR3P36575 388 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 ANXA11P50995 505 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 HPCAP84074 193 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 ROR2Q01974 943 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 ADRM1Q16186 407 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 DPY19L1Q2PZI1 675 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 MRPL2Q5T653 305 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 WBP2NLQ6ICG8 309 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 NIPAL3Q6P499 406 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 SPATA21Q7Z572 469 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 CCDC36Q8IYA8 594 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 LRRC34Q8IZ02 419 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 SVOPLQ8N434 492 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 RIBC1Q8N443 379 aaPredicted RBP8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 SEMA6DQ8NFY4 1073 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 SGMS2Q8NHU3 365 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 TCP10LQ8TDR4 215 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 CKAP2Q8WWK9 683 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 CCDC115Q96NT0 180 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 SLC35A5Q9BS91 424 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 TAPBPLQ9BX59 468 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 RACGAP1Q9H0H5 632 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 SEC61A2Q9H9S3 476 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 RLIMQ9NVW2 624 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 BTNL2Q9UIR0 455 aa8.51□□□□□ -1.05
TRAFD1-207ENST00000550051 A0A096LPE4 126 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 A0A096LPI6 279 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 IGHV2OR16-5A0A0B4J2B6 119 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 LOC102725191A0A1B0GVB3 256 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 A0A1W2PPZ6 126 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 TLDC2A0PJX2 215 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 SH3PXD2BA1X283 911 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 TMEM89A2RUT3 159 aa8.5□□□□□ -1.05
TRAFD1-207ENST00000550051 CCDC154A6NI56 674 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms