RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 AGAP6Q5VW22 663 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 REEP3Q6NUK4 255 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 KLHL24Q6TFL4 600 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 B3GLCTQ6Y288 498 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 CREB3L2Q70SY1 520 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 COMTD1Q86VU5 262 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 KDM8Q8N371 416 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 C17orf78Q8N4C9 275 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 MAPK1IP1LQ8NDC0 245 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 ELOA3Q8NG57 546 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 SLC35B4Q969S0 331 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 HS6ST2Q96MM7 605 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 PTDSS2Q9BVG9 487 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 RSPO3Q9BXY4 272 aaPredicted RBP14.32□□□□□ -0.12
VPS29-207ENST00000549970 PIF1Q9H611 641 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 GDF2Q9UK05 429 aaPredicted RBP14.32□□□□□ -0.12
VPS29-207ENST00000549970 AMDHD2Q9Y303 409 aa14.32□□□□□ -0.12
VPS29-207ENST00000549970 HIVEP2P31629 2446 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 EVPLLA8MZ36 301 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 HMGB1P1B2RPK0 211 aaPredicted RBP14.31□□□□□ -0.12
VPS29-207ENST00000549970 FTCDNL1E5RQL4 147 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 VAMP5O95183 116 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 PNMTP11086 282 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 HTR2AP28223 471 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 AQP1P29972 269 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 LGALS3BPQ08380 585 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 SCARB2Q14108 478 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 GLIPR1L2Q4G1C9 344 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 HIKESHIQ53FT3 197 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 NIPAL3Q6P499 406 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 HDXQ7Z353 690 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 ABHD12BQ7Z5M8 362 aaPredicted RBP14.31□□□□□ -0.12
VPS29-207ENST00000549970 KRT73Q86Y46 540 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 DEPDC4Q8N2C3 294 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 MFSD8Q8NHS3 518 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 KTI12Q96EK9 354 aaPredicted RBP14.31□□□□□ -0.12
VPS29-207ENST00000549970 ALKBH3Q96Q83 286 aaPredicted RBP14.31□□□□□ -0.12
VPS29-207ENST00000549970 DHRS9Q9BPW9 319 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 SPATA5L1Q9BVQ7 753 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 GRIP2Q9C0E4 1043 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 SEC14L4Q9UDX3 406 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 CORO2BQ9UQ03 480 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 RASD1Q9Y272 281 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 B3GALT5Q9Y2C3 310 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 ALPK2Q86TB3 2170 aa14.31□□□□□ -0.12
VPS29-207ENST00000549970 A0A1B0GWA3 101 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 ZNF587BE7ETH6 402 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 TPST1O60507 370 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 GPX2P18283 190 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 SLC6A2P23975 617 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 TTKP33981 857 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 FABP6P51161 128 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 PRPS1P60891 318 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 NCALDP61601 193 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 DHRS4L2Q6PKH6 230 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 C6orf89Q6UWU4 347 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 EPHX4Q8IUS5 362 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 FBXL14Q8N1E6 418 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 MUC15Q8N387 334 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 CKAP2Q8WWK9 683 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 MAGEB18Q96M61 343 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 PRR14Q9BWN1 585 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 CACNG6Q9BXT2 260 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 RABEP2Q9H5N1 569 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 CBLN4Q9NTU7 201 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 TMEM45AQ9NWC5 275 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 GMEB1Q9Y692 573 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 ATP23Q9Y6H3 246 aa14.3□□□□□ -0.12
VPS29-207ENST00000549970 INAFM1C9JVW0 142 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 UPK3AO75631 287 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 LGI1O95970 557 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 WNT11O96014 354 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 ZNF43P17038 809 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 CLDN17P56750 224 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 RGS8P57771 180 aaPredicted RBP14.29□□□□□ -0.12
VPS29-207ENST00000549970 IRX1P78414 480 aaPredicted RBP14.29□□□□□ -0.12
VPS29-207ENST00000549970 ALG10BQ5I7T1 473 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 DLEU7Q6UYE1 221 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 LSMEM1Q8N8F7 131 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 RNF217Q8TC41 542 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 DNAJA4Q8WW22 397 aaPredicted RBP14.29□□□□□ -0.12
VPS29-207ENST00000549970 TAAR8Q969N4 342 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 ZNF607Q96SK3 696 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 CPPED1Q9BRF8 314 aaPredicted RBP14.29□□□□□ -0.12
VPS29-207ENST00000549970 REG4Q9BYZ8 158 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 TMEM38AQ9H6F2 299 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 FKRPQ9H9S5 495 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 C12orf10Q9HB07 376 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 LEF1Q9UJU2 399 aaPredicted RBP14.29□□□□□ -0.12
VPS29-207ENST00000549970 SLC13A4Q9UKG4 626 aa14.29□□□□□ -0.12
VPS29-207ENST00000549970 ATP6V1G2-DDX39BF2Z307 99 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 M0R082 166 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 SSX4O60224 188 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 CBLP22681 906 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 GRPRP30550 384 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 PPP2R2BQ00005 443 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 IL1RL1Q01638 556 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 ADRM1Q16186 407 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 TBRG1Q3YBR2 411 aa14.28□□□□□ -0.12
VPS29-207ENST00000549970 RUNDC3AQ59EK9 446 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms