RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 MAKP20794 623 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 CBLP22681 906 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 GTF2E2P29084 291 aaKnown RBP18.82■□□□□ 0.6
CACNB3-210ENST00000548874 IST1P53990 364 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 OTUD3Q5T2D3 398 aaPredicted RBP18.82■□□□□ 0.6
CACNB3-210ENST00000548874 RIPPLY2Q5TAB7 128 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 ZNF770Q6IQ21 691 aaPredicted RBP18.82■□□□□ 0.6
CACNB3-210ENST00000548874 PPP4R4Q6NUP7 873 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 NCCRP1Q6ZVX7 275 aaPredicted RBP18.82■□□□□ 0.6
CACNB3-210ENST00000548874 P4HA3Q7Z4N8 544 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 FJX1Q86VR8 437 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 SLC43A2Q8N370 569 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 LINC00471Q8N535 108 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 ADPRHL1Q8NDY3 354 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 PIGXQ8TBF5 258 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 ABHD3Q8WU67 409 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 ASPNQ9BXN1 380 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 PRRG4Q9BZD6 226 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 CHST11Q9NPF2 352 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 NANSQ9NR45 359 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 ING1Q9UK53 422 aaPredicted RBP18.82■□□□□ 0.6
CACNB3-210ENST00000548874 TMEM5Q9Y2B1 443 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 B3GALT5Q9Y2C3 310 aa18.82■□□□□ 0.6
CACNB3-210ENST00000548874 PYCARD-AS1I3L0S3 204 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 LRRTM2O43300 516 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 KLF4O43474 513 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 RCBTB2O95199 551 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 FUT1P19526 365 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 DNAJA1P31689 397 aaKnown RBP18.81■□□□□ 0.6
CACNB3-210ENST00000548874 PMPCAQ10713 525 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 PDK3Q15120 406 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 RNPS1Q15287 305 aaKnown RBP18.81■□□□□ 0.6
CACNB3-210ENST00000548874 GUSBP1Q15486 140 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 MICAQ29983 383 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 HMBOX1Q6NT76 420 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 H1FNTQ75WM6 255 aaPredicted RBP18.81■□□□□ 0.6
CACNB3-210ENST00000548874 ZER1Q7Z7L7 766 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 TMEM179BQ7Z7N9 219 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 CCDC103Q8IW40 242 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 LRRC17Q8N6Y2 441 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 OR5J2Q8NH18 312 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 LRTOMTQ8WZ04 291 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 ZFP3Q96NJ6 502 aa18.81■□□□□ 0.6
CACNB3-210ENST00000548874 ZNF716A6NP11 495 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 OR10H3O60404 316 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 CCNB2O95067 398 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 TSPAN19P0C672 248 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 SLC16A1P53985 500 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 LAPTM4AQ15012 233 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 OR2A2Q6IF42 318 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 C1orf94Q6P1W5 598 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 PGBD2Q6P3X8 592 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 MEX3DQ86XN8 651 aaKnown RBP18.8■□□□□ 0.6
CACNB3-210ENST00000548874 CDK20Q8IZL9 346 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 NAXEQ8NCW5 288 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 FAM46AQ96IP4 442 aaKnown RBP18.8■□□□□ 0.6
CACNB3-210ENST00000548874 PSD2Q9BQI7 771 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 SF3B5Q9BWJ5 86 aaKnown RBP18.8■□□□□ 0.6
CACNB3-210ENST00000548874 GP6Q9HCN6 339 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 KRCC1Q9NPI7 259 aaPredicted RBP18.8■□□□□ 0.6
CACNB3-210ENST00000548874 FANCFQ9NPI8 374 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 DOCK7Q96N67 2140 aa18.8■□□□□ 0.6
CACNB3-210ENST00000548874 HIVEP3Q5T1R4 2406 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 IGKV3D-15A0A087WSY6 115 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 ARRDC5A6NEK1 342 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 EFCAB9A8MZ26 197 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 J3QKU1 62 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 PLPP3O14495 311 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 CDC42EP2O14613 210 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 VAMP5O95183 116 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 IL2RAP01589 272 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 IFNGR2P38484 337 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 GPR4P46093 362 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 ELF3P78545 371 aaPredicted RBP18.79■□□□□ 0.6
CACNB3-210ENST00000548874 RASGEF1BQ0VAM2 473 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 PMS2P3Q13401 168 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 SLC17A1Q14916 467 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 GTF2IRD2BQ6EKJ0 949 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 AMIGO2Q86SJ2 522 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 GTF2IRD2Q86UP8 949 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 OR9Q2Q8NGE9 314 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 STMN2Q93045 179 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 NRBF2Q96F24 287 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 CCDC120Q96HB5 630 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 GMPPAQ96IJ6 420 aaPredicted RBP18.79■□□□□ 0.6
CACNB3-210ENST00000548874 GPA33Q99795 319 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 BDH2Q9BUT1 245 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 BCO1Q9HAY6 547 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 GLRX2Q9NS18 164 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 C6orf203Q9P0P8 240 aaPredicted RBP18.79■□□□□ 0.6
CACNB3-210ENST00000548874 KLHL9Q9P2J3 617 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 B3GAT1Q9P2W7 334 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 RASD1Q9Y272 281 aa18.79■□□□□ 0.6
CACNB3-210ENST00000548874 A0A0G2JNJ9 132 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 LOC102725191A0A1B0GVB3 256 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 A0A1W2PNV4 684 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 MS4A18H0YCH9 400 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 SS18L1O75177 396 aaPredicted RBP18.78■□□□□ 0.6
CACNB3-210ENST00000548874 E2F6O75461 281 aa18.78■□□□□ 0.6
CACNB3-210ENST00000548874 CRHP06850 196 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms