RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 ANK3Q12955 4377 aaKnown RBP11.67□□□□□ -0.54
CPSF6-204ENST00000547486 A0A096LNT2 108 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 TMEM247A6NEH6 219 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 GPRIN2O60269 458 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 TPST1O60507 370 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 ERLIN1O75477 346 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 LGI1O95970 557 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 RPS5P46782 204 aaKnown RBP11.66□□□□□ -0.54
CPSF6-204ENST00000547486 TGFBR3Q03167 851 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 DMTNQ08495 405 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 GLIPR1L2Q4G1C9 344 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 LRIF1Q5T3J3 769 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 AGBL2Q5U5Z8 902 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 PRAMEF8Q5VWM4 474 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 PRAMEF7Q5VXH5 474 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 FBXL14Q8N1E6 418 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 DEPDC4Q8N2C3 294 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 STK35Q8TDR2 534 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 SLC25A36Q96CQ1 311 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 ADAD1Q96M93 576 aaKnown RBP11.66□□□□□ -0.54
CPSF6-204ENST00000547486 IKZF5Q9H5V7 419 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 TCF7L2Q9NQB0 619 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 VAPAQ9P0L0 249 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 MOKQ9UQ07 419 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 ALPK2Q86TB3 2170 aa11.66□□□□□ -0.54
CPSF6-204ENST00000547486 FBN1P35555 2871 aaKnown RBP11.65□□□□□ -0.54
CPSF6-204ENST00000547486 IGHV1-18A0A0C4DH31 117 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 ATP6V1G2-DDX39BF2Z307 99 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 NR5A2O00482 541 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 VAMP5O95183 116 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 TGDSO95455 350 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 PNMTP11086 282 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 HTR2AP28223 471 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 FADDQ13158 208 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 RAB35Q15286 201 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 NRF1Q16656 503 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 MST1LQ2TV78 715 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 TBRG1Q3YBR2 411 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 ZNF544Q6NX49 715 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 NIPAL3Q6P499 406 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 GOLGA6L1Q8N7Z2 621 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 OR1K1Q8NGR3 316 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 NFKBIDQ8NI38 313 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 BBS10Q8TAM1 723 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 BCL2L2Q92843 193 aaPredicted RBP11.65□□□□□ -0.54
CPSF6-204ENST00000547486 SLC35B4Q969S0 331 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 SPDL1Q96EA4 605 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 WFDC6Q9BQY6 131 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 RHNO1Q9BSD3 238 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 ARMC7Q9H6L4 198 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 TMEM45AQ9NWC5 275 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 CCDC167Q9P0B6 97 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
CPSF6-204ENST00000547486 IGKV1D-42A0A075B6H8 117 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 TRBV5-3A0A0A0MS03 114 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 C5orf58C9J3I9 102 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 H7C417 338 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 CD5LO43866 347 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 KRT33AO76009 404 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF432O94892 652 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 AHSA1O95433 338 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 ARAFP10398 606 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 ETS2P15036 469 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 PRKAR1BP31321 381 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
CPSF6-204ENST00000547486 NUDT6P53370 316 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 AQP5P55064 265 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 STX1BP61266 288 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 CDK6Q00534 326 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 ADRM1Q16186 407 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 TTMPQ5BVD1 217 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 GCNT6Q5T4J0 391 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 C6orf89Q6UWU4 347 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF525Q8N782 197 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 LSMEM1Q8N8F7 131 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 LRRC8CQ8TDW0 803 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 NANOS1Q8WY41 292 aaKnown RBP11.64□□□□□ -0.55
CPSF6-204ENST00000547486 TAAR8Q969N4 342 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 ALKBH3Q96Q83 286 aaPredicted RBP11.64□□□□□ -0.55
CPSF6-204ENST00000547486 CCDC28BQ9BUN5 200 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 NELFAQ9H3P2 528 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 RAD21L1Q9H4I0 556 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 FKRPQ9H9S5 495 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 CACYBPQ9HB71 228 aaKnown RBP11.64□□□□□ -0.55
CPSF6-204ENST00000547486 YAE1D1Q9NRH1 226 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 B3GAT1Q9P2W7 334 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 GMEB1Q9Y692 573 aa11.64□□□□□ -0.55
CPSF6-204ENST00000547486 A0A096LPE4 126 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 A0A1B0GWA3 101 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 A0A1W2PPZ6 126 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 ELOA3DA6NLF2 546 aaPredicted RBP11.63□□□□□ -0.55
CPSF6-204ENST00000547486 ZNF587BE7ETH6 402 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 POLR3GO15318 223 aaPredicted RBP11.63□□□□□ -0.55
CPSF6-204ENST00000547486 TPST2O60704 377 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 FZD7O75084 574 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 LY6HO94772 140 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 WNT11O96014 354 aa11.63□□□□□ -0.55
CPSF6-204ENST00000547486 TP53P04637 393 aaPredicted RBP11.63□□□□□ -0.55
CPSF6-204ENST00000547486 CBLP22681 906 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms