RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 ZNF175Q9Y473 711 aa14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 MAGED1Q9Y5V3 778 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-212ENST00000545856 A0A0J9YW62 118 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 NPIPA5E9PKD4 350 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 EIF1AYO14602 144 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 CDC42EP2O14613 210 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 IDH3BO43837 385 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 PTP4A3O75365 173 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 OR6A2O95222 327 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 EDN3P14138 238 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 GABRA1P14867 456 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 GRPRP30550 384 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC6A6P31641 620 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 TDGF1P3P51864 188 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 CARD18P57730 90 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 NPRL3Q12980 569 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 IL18R1Q13478 541 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 PDK3Q15120 406 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 LRRC36Q1X8D7 754 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 WLSQ5T9L3 541 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 HBMQ6B0K9 141 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 CHMP1BQ7LBR1 199 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 OR5M1Q8NGP8 315 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 FANK1Q8TC84 345 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 GTPBP3Q969Y2 492 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 ZNF184Q99676 751 aaPredicted RBP14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 TACO1Q9BSH4 297 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 TMEM185BQ9H7F4 350 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 SMURF2Q9HAU4 748 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC25A19Q9HC21 320 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 REV1Q9UBZ9 1251 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 MCTS1Q9ULC4 181 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 NPIPA1Q9UND3 350 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 LIPGQ9Y5X9 500 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 NBEAQ8NFP9 2946 aa14.37□□□□□ -0.11
PRPF40A-212ENST00000545856 AQP7P3A6NL99 342 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 AHRRA9YTQ3 701 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 IMPA2O14732 288 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 ARPC3O15145 178 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC16A6O15403 523 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 WDR1O75083 606 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 ENPP1P22413 925 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 CRISP1P54107 249 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 FOXK1P85037 733 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 RBPJQ06330 500 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 PUDPQ08623 228 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 KEAP1Q14145 624 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 OR7A5Q15622 319 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 FAM205BPQ63HN1 556 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC27A4Q6P1M0 643 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 DPY19L2P2Q6ZN68 376 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 PXKQ7Z7A4 578 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 ZNF555Q8NEP9 628 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 ANKK1Q8NFD2 765 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 OR2T33Q8NG76 320 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 OR10D3Q8NH80 312 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 SMPDL3BQ92485 455 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 WDYHV1Q96HA8 205 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 MOGAT1Q96PD6 335 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 GPA33Q99795 319 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 OR52D1Q9H346 318 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 NOX1Q9Y5S8 564 aa14.36□□□□□ -0.11
PRPF40A-212ENST00000545856 FIGNL2A6NMB9 653 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 H3BN98 237 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 M0R082 166 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 WISP1O95388 367 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 SYNGR4O95473 234 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 HMGN1P05114 100 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 POU2F1P14859 743 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 TCEA1P23193 301 aaKnown RBP14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 SMSP52788 366 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 CLDN20P56880 219 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 OR2B6P58173 313 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 LSM11P83369 360 aaKnown RBP eCLIP14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 LTBQ06643 244 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 PMS2P3Q13401 168 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 EIF2S3LQ2VIR3 472 aaKnown RBP14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC36A3Q495N2 470 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 ALG10Q5BKT4 473 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 EMC4Q5J8M3 183 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 C1QL3Q5VWW1 255 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 GPR139Q6DWJ6 353 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 GTF2IRD2BQ6EKJ0 949 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 PCSK4Q6UW60 755 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 IZUMO2Q6UXV1 221 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 ADGRE4PQ86SQ3 457 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 GTF2IRD2Q86UP8 949 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 ZGRF1Q86YA3 2104 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 GALNT4Q8N4A0 578 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 DHRSXQ8N5I4 330 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 ATP6V1C2Q8NEY4 427 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 OR13C2Q8NGS9 318 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 ZNF417Q8TAU3 575 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC39A7Q92504 469 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 SLC25A36Q96CQ1 311 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 SNRNP40Q96DI7 357 aaKnown RBP14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 HRASLS5Q96KN8 279 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 ZNF587Q96SQ5 575 aaPredicted RBP14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 PITX2Q99697 317 aa14.35□□□□□ -0.11
PRPF40A-212ENST00000545856 GRIP2Q9C0E4 1043 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms