RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SCO1O75880 301 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 MPC2O95563 127 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 TPOP07202 933 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 SULT1A3P0DMM9 295 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 SULT1A4P0DMN0 295 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 SOX2P48431 317 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 CCR9P51686 369 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 C1orf61Q13536 156 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 UBE2NLQ5JXB2 153 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 OTPQ5XKR4 325 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 Q6ZSR6 202 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 OVCH1Q7RTY7 1134 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 GRAMD2AQ8IUY3 354 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 SLITRK4Q8IW52 837 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 C7orf61Q8IZ16 206 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 METTL27Q8N6F8 245 aaPredicted RBP14.46□□□□□ -0.09
LDLR-204ENST00000545707 POMGNT2Q8NAT1 580 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 OR2T35Q8NGX2 323 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 SLC37A2Q8TED4 501 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 RBM18Q96H35 190 aaKnown RBP14.46□□□□□ -0.09
LDLR-204ENST00000545707 MRGPRX1Q96LB2 322 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 Q96M85 177 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 LIN7BQ9HAP6 207 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 HRASLSQ9HDD0 168 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 FANCMQ8IYD8 2048 aa14.46□□□□□ -0.1
LDLR-204ENST00000545707 MEIKINA0A087WXM9 373 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 APBB3O95704 486 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 CFDP00746 253 aaPredicted RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 CSTAP01040 98 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 HNRNPA2B1P22626 353 aaKnown RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 RPS27P42677 84 aaKnown RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 CDKN2AP42771 156 aaKnown RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 RAB38P57729 211 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 STX4Q12846 297 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 LEG1Q6P5S2 330 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 RNF44Q7L0R7 432 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 DNAAF1Q8NEP3 725 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 OR2T4Q8NH00 348 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 OR56B4Q8NH76 319 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 VSTM2LQ96N03 204 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 TP53BP1Q12888 1972 aaPredicted RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 HEATR5AQ86XA9 2040 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 A0A0J9YY10 115 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 IFITM5A6NNB3 132 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 GATBO75879 557 aaKnown RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 OR8G3PP0DMU2 310 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 AQP2P41181 271 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 ILF3Q12906 894 aaKnown RBP eCLIP14.45□□□□□ -0.18e-8■■■□□ 17.5
LDLR-204ENST00000545707 TOR2AQ5JU69 321 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 C9orf50Q5SZB4 431 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 SIGIRRQ6IA17 410 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 UNQ9370/PRO34162Q6UXP9 181 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 NLRC3Q7RTR2 1065 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 CCDC28AQ8IWP9 274 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 C10orf53Q8N6V4 93 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 AVL9Q8NBF6 648 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 OR13H1Q8NG92 308 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 SUN5Q8TC36 379 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 RNF166Q96A37 237 aaPredicted RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 WDR89Q96FK6 387 aaPredicted RBP14.45□□□□□ -0.1
LDLR-204ENST00000545707 DDOQ99489 341 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 SEC22CQ9BRL7 303 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 TMEM106CQ9BVX2 250 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 PRDM9Q9NQV7 894 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 POLE3Q9NRF9 147 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 COPZ2Q9P299 210 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 KLHDC2Q9Y2U9 406 aa14.45□□□□□ -0.1
LDLR-204ENST00000545707 ZNF879B4DU55 563 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 G3V3Q6 166 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 H7C1C5 153 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 GMFGO60234 142 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 HOXC4P09017 264 aaPredicted RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 LCN6P62502 163 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 GGTLC2Q14390 218 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 ODF4Q2M2E3 257 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 SLC22A10Q63ZE4 541 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 APOOLQ6UXV4 268 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 CEP76Q8TAP6 659 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 SORCS2Q96PQ0 1159 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 PBX4Q9BYU1 374 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 TWSG1Q9GZX9 223 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 YBX2Q9Y2T7 364 aaKnown RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 OR10H1Q9Y4A9 318 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 A0A087WUJ7 227 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 TMEM72A0PK05 275 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 ARPC1BO15143 372 aaKnown RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 FOXS1O43638 330 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 GSTZ1O43708 216 aaPredicted RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 TMIGD3P0DMS9 266 aaPredicted RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 CT45A8P0DMV1 189 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 CT45A9P0DMV2 189 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 MAOAP21397 527 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 DPP4P27487 766 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 RAD52P43351 418 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 RPL6Q02878 288 aaKnown RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 LGALS3BPQ08380 585 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 PLA2G7Q13093 441 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 EXOSC2Q13868 293 aaKnown RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 CT45A2Q5DJT8 189 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms