RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 CCR9P51686 369 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 SLC16A1P53985 500 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 NXPH1P58417 271 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 TSPAN5P62079 268 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 EEF1A1P68104 462 aaKnown RBP17.26■□□□□ 0.35
MSLN-202ENST00000545450 TCTE1Q5JU00 501 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 RPL13AP3Q6NVV1 102 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 KANSL1Q7Z3B3 1105 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 OOSP2Q86WS3 158 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 SLC2A12Q8TD20 617 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 KLHL15Q96M94 604 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 CMTM3Q96MX0 182 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 AIFM2Q9BRQ8 373 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 HCN3Q9P1Z3 774 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 SLC35A3Q9Y2D2 325 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 WDR45Q9Y484 360 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 PCDHGA9Q9Y5G4 932 aaKnown RBP17.26■□□□□ 0.35
MSLN-202ENST00000545450 KCNMB2Q9Y691 235 aa17.26■□□□□ 0.35
MSLN-202ENST00000545450 OGG1O15527 345 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ZNF749O43361 778 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 HRGP04196 525 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ATF4P18848 351 aaPredicted RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 PSMB1P20618 241 aaKnown RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 C4BPBP20851 252 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 NT5EP21589 574 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ZP3P21754 424 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 CSNK1EP49674 416 aaKnown RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 BTN3A2P78410 334 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 GARNL3Q5VVW2 1013 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 SFRP4Q6FHJ7 346 aaPredicted RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 MFSD12Q6NUT3 480 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ARL14Q8N4G2 192 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 SMAP2Q8WU79 429 aaPredicted RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 TMEM239Q8WW34 195 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 CDS1Q92903 461 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ZFYVE21Q9BQ24 234 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 HRASLSQ9HDD0 168 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 C12orf4Q9NQ89 552 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 RABL2AQ9UBK7 228 aaPredicted RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 RABL2BQ9UNT1 228 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ZNF780BQ9Y6R6 833 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 A0A1B0GUH1 482 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 A0A1W2PPK0 400 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 PLSCR5A0PG75 271 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ANKRD61A6NGH8 418 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ARL6IP5O75915 188 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 LYPD3O95274 346 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 TFP02787 698 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 UCHL1P09936 223 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 CLUP10909 449 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 PRG2P13727 222 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 HTR2AP28223 471 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 MAP2K6P52564 334 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ACTC1P68032 377 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ACTA1P68133 377 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 UBE2NLQ5JXB2 153 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 METTL11BQ5VVY1 283 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 FAAH2Q6GMR7 532 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 FAM111BQ6SJ93 734 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 CHMP1BQ7LBR1 199 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 SSX6Q7RTT6 188 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 OVCH1Q7RTY7 1134 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 RANBP3LQ86VV4 465 aaPredicted RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 GKN2Q86XP6 184 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ZCCHC10Q8TBK6 192 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 ZNF578Q96N58 590 aaPredicted RBP17.25■□□□□ 0.35
MSLN-202ENST00000545450 SFXN2Q96NB2 322 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 IFT27Q9BW83 186 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 PIPOXQ9P0Z9 390 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 NTMQ9P121 344 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 PCDH15Q96QU1 1955 aa17.25■□□□□ 0.35
MSLN-202ENST00000545450 CENPVL1A0A0U1RR11 272 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 MFSD2BA6NFX1 497 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 SDC3O75056 442 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 AGR2O95994 175 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 DUSP8Q13202 625 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 ARHGAP11BQ3KRB8 267 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 EIPR1Q53HC9 387 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 TMEM255AQ5JRV8 349 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 ELFN2Q5R3F8 820 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 FAM122CQ6P4D5 195 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 TSSK4Q6SA08 328 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 TMPRSS11FQ6ZWK6 438 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 IZUMO1Q8IYV9 350 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 CMTM4Q8IZR5 234 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 SPICQ8N5J4 248 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 ESX1Q8N693 406 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 PEX11GQ96HA9 241 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 CACYBPQ9HB71 228 aaKnown RBP17.24■□□□□ 0.35
MSLN-202ENST00000545450 SIGLEC7Q9Y286 467 aa17.24■□□□□ 0.35
MSLN-202ENST00000545450 H0YGG7 62 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 THBS1P07996 1170 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 SMIM10L1P0DMW3 83 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 FASLGP48023 281 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 VEGFCP49767 419 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 ARF3P61204 181 aaPredicted RBP17.23■□□□□ 0.35
MSLN-202ENST00000545450 TMEM81Q6P7N7 255 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 C3P1Q6ZMU1 363 aa17.23■□□□□ 0.35
MSLN-202ENST00000545450 RNF44Q7L0R7 432 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms