RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 CD5LO43866 347 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 LDB3O75112 727 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 CBR3O75828 277 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 RLN1P04808 185 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 MPGP29372 298 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 RPL3P39023 403 aaKnown RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 CASP3P42574 277 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 SLC1A2P43004 574 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 SLCO1A2P46721 670 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 TMED10P49755 219 aaKnown RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 ENTPD1P49961 510 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 RASSF2P50749 326 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 HNRNPH2P55795 449 aaKnown RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 ATP5J2P56134 94 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 ZP1P60852 638 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 IGLV3-21P80748 117 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 CDKL1Q00532 357 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 KIF5AQ12840 1032 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 GAGE2BQ13066 116 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 CAPRIN1Q14444 709 aaKnown RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 EFNB3Q15768 340 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 CTF1Q16619 201 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 CLEC12BQ2HXU8 276 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 GAGE2EQ4V326 116 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 C18orf63Q68DL7 685 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 TIGD3Q6B0B8 471 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 HIST2H2AA3Q6FI13 130 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 OR2A2Q6IF42 318 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 GAGE2AQ6NT46 116 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 NUP54Q7Z3B4 507 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 TMPRSS11BQ86T26 416 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 CTAGE6Q86UF2 777 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 C9orf40Q8IXQ3 194 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 OR7G3Q8NG95 312 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 OR10G3Q8NGC4 313 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 OR1J4Q8NGS1 313 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 OR2AJ1Q8NGZ0 328 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 SPPL2AQ8TCT8 520 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 SLC44A1Q8WWI5 657 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 DTNBP1Q96EV8 351 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 LINGO1Q96FE5 620 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 OTUB1Q96FW1 271 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 TSNARE1Q96NA8 513 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 MUS81Q96NY9 551 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 SERPINB12Q96P63 405 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 FAM111AQ96PZ2 611 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 PELOQ9BRX2 385 aaKnown RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 FN3KQ9H479 309 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 RRAGDQ9NQL2 400 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 YAE1D1Q9NRH1 226 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 GAGE2DQ9UEU5 116 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 C15orf41Q9Y2V0 281 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 SONP18583 2426 aaKnown RBP5.39□□□□□ -1.55
CPSF7-222ENST00000544585 USF3Q68DE3 2245 aa5.39□□□□□ -1.55
CPSF7-222ENST00000544585 TO15178 435 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 PHF1O43189 567 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 B3GALNT1O75752 331 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 FAM157CP0CG43 387 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 POU2F1P14859 743 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 NAGAP17050 411 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 CPN2P22792 545 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 WNT5AP41221 380 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 MAGEA6P43360 314 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 KCNJ1P48048 391 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 SLC9A3P48764 834 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 ELLP55199 621 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 CD81P60033 236 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 KRTAP1-1Q07627 177 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 FUT7Q11130 342 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 LASP1Q14847 261 aaKnown RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 BCL2A1Q16548 175 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 KBTBD12Q3ZCT8 623 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 TMEM35AQ53FP2 167 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 EIPR1Q53HC9 387 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 HSP90AA5PQ58FG0 334 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 BEX5Q5H9J7 111 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 ZNF788Q6ZQV5 615 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 CHMP1BQ7LBR1 199 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 ZNF367Q7RTV3 350 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 KIAA1328Q86T90 577 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 FAM219AQ8IW50 185 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 FOXRED2Q8IWF2 684 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 PEX5LQ8IYB4 626 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 ST13P4Q8IZP2 240 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 RNF10Q8N5U6 811 aaKnown RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 ZNF611Q8N823 705 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 ACOT4Q8N9L9 421 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 BOLLQ8N9W6 283 aaKnown RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 BBOF1Q8ND07 529 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 OCC1Q8TAD7 63 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 PPWD1Q96BP3 646 aaKnown RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 RHBDF1Q96CC6 855 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 STARD4Q96DR4 205 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 PGM2Q96G03 612 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 BSCL2Q96G97 398 aaPredicted RBP5.38□□□□□ -1.55
CPSF7-222ENST00000544585 RILPQ96NA2 401 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 CSF3RQ99062 836 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 KRT12Q99456 494 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 FEVQ99581 238 aa5.38□□□□□ -1.55
CPSF7-222ENST00000544585 MAPKAP1Q9BPZ7 522 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms