RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 COPZ1P61923 177 aa19.65■□□□□ 0.74
CDKN3-207ENST00000543789 COX20Q5RI15 118 aa19.65■□□□□ 0.74
CDKN3-207ENST00000543789 WBP2NLQ6ICG8 309 aa19.65■□□□□ 0.74
CDKN3-207ENST00000543789 CADM2Q8N3J6 435 aa19.65■□□□□ 0.74
CDKN3-207ENST00000543789 FAM169BQ8N8A8 192 aa19.65■□□□□ 0.74
CDKN3-207ENST00000543789 NUF2Q9BZD4 464 aa19.65■□□□□ 0.74
CDKN3-207ENST00000543789 MOV10Q9HCE1 1003 aaKnown RBP19.65■□□□□ 0.74
CDKN3-207ENST00000543789 HEATR1Q9H583 2144 aaKnown RBP19.64■□□□□ 0.74
CDKN3-207ENST00000543789 LRP5LA4QPB2 252 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 CDHR4A6H8M9 788 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 VSTM5A8MXK1 200 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 BIRC5O15392 142 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 SNUPNO95149 360 aaKnown RBP19.64■□□□□ 0.73
CDKN3-207ENST00000543789 IGLV1-44P01699 117 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 PGRP06401 933 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 HOXB1P14653 301 aaPredicted RBP19.64■□□□□ 0.73
CDKN3-207ENST00000543789 SLC1A6P48664 564 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 UFM1P61960 85 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 TUBA1BP68363 451 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 TUBA4AP68366 448 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 PRAMEF8Q5VWM4 474 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 PRAMEF7Q5VXH5 474 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 NIPAL3Q6P499 406 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 TUBA1AQ71U36 451 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 LINGO2Q7L985 606 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 EPHX4Q8IUS5 362 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 OR52P1PQ8NH57 321 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 PNPT1Q8TCS8 783 aaKnown RBP19.64■□□□□ 0.73
CDKN3-207ENST00000543789 ALKBH3Q96Q83 286 aaPredicted RBP19.64■□□□□ 0.73
CDKN3-207ENST00000543789 OR52E6Q96RD3 313 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 SOX7Q9BT81 388 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 RASD1Q9Y272 281 aa19.64■□□□□ 0.73
CDKN3-207ENST00000543789 MALRD1Q5VYJ5 2156 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 UPK3AO75631 287 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 GSNP06396 782 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 TFPTP0C1Z6 253 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 CALCRP30988 508 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 CDKN2CP42773 168 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 LRRC74AQ0VAA2 488 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 LIN52Q52LA3 116 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 C1orf140Q5VVS0 124 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 VRK2Q86Y07 508 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 KIRREL3Q8IZU9 778 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 NUP37Q8NFH4 326 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 NEU4Q8WWR8 484 aaPredicted RBP19.63■□□□□ 0.73
CDKN3-207ENST00000543789 SORT1Q99523 831 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 LINC00470Q9BZP3 86 aa19.63■□□□□ 0.73
CDKN3-207ENST00000543789 ANK2Q01484 3957 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 KRT75O95678 551 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 ERCC1P07992 297 aaPredicted RBP19.62■□□□□ 0.73
CDKN3-207ENST00000543789 DAOP14920 347 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 GIFP27352 417 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 MAPK11Q15759 364 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 OGFOD2Q6N063 350 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 ZNF836Q6ZNA1 936 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 RFLNBQ8N5W9 214 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 DOK1Q99704 481 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 ZNF442Q9H7R0 627 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 MEAF6Q9HAF1 191 aa19.62■□□□□ 0.73
CDKN3-207ENST00000543789 ARFGEF3Q5TH69 2177 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 A0A096LPI6 279 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 hCG_2039718K7EN88 272 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 FRS3O43559 492 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 IGKV3-15P01624 115 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 ALDOCP09972 364 aaKnown RBP19.61■□□□□ 0.73
CDKN3-207ENST00000543789 CBR1P16152 277 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 NCF2P19878 526 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-207ENST00000543789 IL12AP29459 219 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 THBS4P35443 961 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 CHN2P52757 468 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 SH3BGRP55822 239 aaPredicted RBP19.61■□□□□ 0.73
CDKN3-207ENST00000543789 ROR2Q01974 943 aaKnown RBP19.61■□□□□ 0.73
CDKN3-207ENST00000543789 HGFACQ04756 655 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 ZSWIM7Q19AV6 140 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 HPS1Q92902 700 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 NELFAQ9H3P2 528 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 SEC61A2Q9H9S3 476 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 AIG1Q9NVV5 245 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 CALML5Q9NZT1 146 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 P2RX2Q9UBL9 471 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 HAO1Q9UJM8 370 aa19.61■□□□□ 0.73
CDKN3-207ENST00000543789 TMEM229AB2RXF0 380 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 TCF21O43680 179 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 NPIPB7O75200 414 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 TACSTD2P09758 323 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 NPR2P20594 1047 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 LARS2Q15031 903 aaKnown RBP19.6■□□□□ 0.73
CDKN3-207ENST00000543789 ZCCHC24Q8N2G6 241 aaKnown RBP19.6■□□□□ 0.73
CDKN3-207ENST00000543789 KDM8Q8N371 416 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 CLIP4Q8N3C7 705 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 LINC01356Q8N9X3 169 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 ANKK1Q8NFD2 765 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 MFSD8Q8NHS3 518 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 STK35Q8TDR2 534 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 ANKRD27Q96NW4 1050 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 ZBTB18Q99592 522 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 TMEM109Q9BVC6 243 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 PNPOQ9NVS9 261 aa19.6■□□□□ 0.73
CDKN3-207ENST00000543789 TMEFF2Q9UIK5 374 aaPredicted RBP19.6■□□□□ 0.73
CDKN3-207ENST00000543789 ZNF232Q9UNY5 417 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms